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Top 5 analysis-pipeline open source projects

Awesome Single Cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

✭ 1,937

awesome-list data-visualization bioinformatics analysis clustering gene-expression dimensionality-reduction data-integration atac-seq single-cell rna-seq-data scrna-seq-data cell-cycle cell-differentiation gene-expression-profiles analysis-pipeline cell-populations rna-seq-experiments cell-clusters

Automatic detection of defected solar panel modules

✭ 59

python HTML detection image-processing image-classification analysis-pipeline

ecephys spike sorting

Modules for processing extracellular electrophysiology data from Neuropixels probes

✭ 55

python c C++Makefile Objective-C++matlab shell electrophysiology spikes analysis-pipeline

Environmental DNA metabarcoding taxonomic identification

✭ 14

python shell r genomics metabarcoding environmental-dna analysis-pipeline

An alternative to MCMC for rapid analysis of models

✭ 40

python Jupyter Notebook TeX emulator model regression model-analysis analysis-pipeline

1-5 of 5 analysis-pipeline projects