GitPlanet
Projects
Users
Categories
Languages
About
All Categories
→
No Category
→ comparative-genomics
Top 7 comparative-genomics open source projects
PCG
𝙋𝙝𝙮𝙡𝙤𝙜𝙚𝙣𝙚𝙩𝙞𝙘 𝘾𝙤𝙢𝙥𝙤𝙣𝙚𝙣𝙩 𝙂𝙧𝙖𝙥𝙝 ⸺ Haskell program and libraries for general phylogenetic graph search
✭ 20
haskell
c
C++
python
Makefile
Dhall
bioinformatics
graph-algorithms
phylogenetics
comparative-genomics
phylogenetic-networks
comparative-linguistics
string-alignment
CAMSA
CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
✭ 18
python
javascript
HTML
powershell
CSS
Batchfile
shell
genomics
comparative-genomics
genome-assembly
genome-scaffolding
scaffold-assembly
asssembly-reconciliation
mcscan
Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format
✭ 18
C++
c
python
shell
genomics
evolution
comparative-genomics
synteny
polyploid
ensembl-compara
The Ensembl Compara Perl API and SQL schema
✭ 43
perl
python
java
shell
r
XS
mysql
api
bioinformatics
database
ensembl
comparative-genomics
gcv
Federating genomes with love (and synteny derived from functional annotations)
✭ 22
typescript
javascript
HTML
SCSS
docker
angular
bioinformatics
microservices
comparative-genomics
federation
synteny
grpc-web
pangenomics
functional-annotations
recentrifuge
Recentrifuge: robust comparative analysis and contamination removal for metagenomics
✭ 79
python
javascript
nanopore
ngs
metagenomics
comparative-genomics
kraken
contamination
clark
robustness
centrifuge
low-biomass
lmat
Asgan
A tool for analysis of assembly graphs
✭ 26
python
comparative-genomics
assembly-graph
quality-metrics
1-7
of
7
comparative-genomics projects