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Top 176 medical-imaging open source projects

Innereye Deeplearning
Medical Imaging Deep Learning library to train and deploy models on Azure Machine Learning and Azure Stack
Grassroots DICOM read-only mirror. Only for Pull Request. Please report bug at
Chexnet With Localization
Weakly Supervised Learning for Findings Detection in Medical Images
Lightweight framework for fast prototyping and training deep neural networks with PyTorch and TensorFlow
Bccd dataset
BCCD (Blood Cell Count and Detection) Dataset is a small-scale dataset for blood cells detection.
Image segmentation - general superpixel segmentation & center detection & region growing
Neural networks toolbox focused on medical image analysis
RadIO is a library for data science research of computed tomography imaging
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
A framework for GPU based high-performance medical image processing and visualization
Visvis - the object oriented approach to visualization
Tools for tissue image stain normalisation and augmentation in Python 3
Medical Transformer
Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation"
Dicom Rs
Pure Rust implementation of the DICOM standard
Javascript implementation of DICOM manipulation
Two-Stage Convolutional Neural Network for Breast Cancer Histology Image Classification. ICIAR 2018 Grand Challenge on BreAst Cancer Histology images (BACH)
Applied Dl 2018
Tel-Aviv Deep Learning Boot-camp: 12 Applied Deep Learning Labs
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
SegAN: Semantic Segmentation with Adversarial Learning
Kiu Net Pytorch
Official Pytorch Code of KiU-Net for Image Segmentation - MICCAI 2020 (Oral)
Deep Histopath
A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge
Official public repository of Gate
COVID deterioration prediction based on chest X-ray radiographs via MoCo-trained image representations
The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core libraries, and basic command-line tools. Extension packages are hosted by the MIRTK GitHub group at
JavaScript library to display interactive medical images including but not limited to DICOM
The OHIF Medical Imaging Viewer is for viewing medical images. It can retrieve and load images from most sources and formats; render sets in 2D, 3D, and reconstructed representations; allows for the manipulation, annotation, and serialization of observations; supports internationalization, OpenID Connect, offline use, hotkeys, and many more features.
Dicom Server
OSS Implementation of DICOMweb standard
Deep Learning For Medical Applications
Deep Learning Papers on Medical Image Analysis
A platform for end-to-end development of machine learning solutions in biomedical imaging
[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
Awesome Medical Imaging
Awesome list of software that I use to do research in medical imaging.
Vnet Tensorflow
Tensorflow implementation of the V-Net architecture for medical imaging segmentation.
Starviewer, a cross-platform open source medical imaging software
X Ray Classification
X-ray Images (Chest images) analysis and anomaly detection using Transfer learning with inception v2
ADN: Artifact Disentanglement Network for Unsupervised Metal Artifact Reduction
Quicknat pytorch
PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
Odil is a C++11 library for the DICOM standard
Cnn Interpretability
🏥 Visualizing Convolutional Networks for MRI-based Diagnosis of Alzheimer’s Disease
DICOM Web Viewer: open source zero footprint medical image viewer.
Data Science Bowl 2018
End-to-end one-class instance segmentation based on U-Net architecture for Data Science Bowl 2018 in Kaggle
Medical Imaging Datasets
A list of Medical imaging datasets.
✭ 1,068
Lightning Covid19
Classification for covid-19 chest X-ray images using Lightning
Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.
1-60 of 176 medical-imaging projects