Top pathology open source projects

Digital Pathology Whole Slide Image Analysis Toolbox

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python TeX deep-learning image-analysis pathology whole-slide-imaging computational-pathology

Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering

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python fish deep-learning image-retrieval histology bioimage-informatics pathology bioimage-analysis image-search-engine histopathology vqvae wsi-images mahmoodlab

Patch-GCN

Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

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python Jupyter Notebook gcn pathology wsi survival-prediction histopathology wsi-images mahmoodlab

TOAD

AI-based pathology predicts origins for cancers of unknown primary - Nature

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python deep-learning cup deep cancer-imaging-research cancer-research histology bioimage-informatics pathology cancer-detection bioimage-analysis toad histopathology wsi-images mahmoodlab unknown-primary

monai-deploy

MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.

cora-docs

CoRA Docs

digipathos

Brazilian Agricultural Research Corporation (EMBRAPA) fully annotated dataset for plant diseases. Plug and play installation over PiP.

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python wrapper open-data dataset plant-pathology plant-disease pathology

Top 7 pathology open source projects