CYTOMINE DOCKER DEPLOYMENT

This is the starting point to install Cytomine. The Dockerfiles are into this repository

How to install it

• Fill the configuration.sh file
• Run the init.sh script
• Run the generated start_deploy.sh script

For more information, see our installation instructions

Remarks

When using our software, we kindly ask you to show our website URL and our logo in all your work (web site, publications, studies, oral presentations, manuals, ...). If you use Cytomine for scientific purpose, please cite Marée et al., Bioinformatics 2016 as reference paper. See our license files for additional details.

• URL: http://www.cytomine.org/
• Logo: Available here
• Scientific paper: Raphaël Marée, Loïc Rollus, Benjamin Stévens, Renaud Hoyoux, Gilles Louppe, Rémy Vandaele, Jean-Michel Begon, Philipp Kainz, Pierre Geurts and Louis Wehenkel. Collaborative analysis of multi-gigapixel imaging data using Cytomine, Bioinformatics, DOI: 10.1093/bioinformatics/btw013, 2016. http://dx.doi.org/10.1093/bioinformatics/btw013