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All Projects → sledilnik → data

sledilnik / data

Licence: AGPL-3.0 license
Collecting and organising COVID-19 data for Slovenia as they come in from various sources

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Build Status GSheets update OstaniZdrav update Schools update Sewage update Vaccination update Vaccination OPSI update Lab tests update

Slovenia COVID-19 Data Collection - Sledilnik.org

Visualized at COVID-19 Sledilnik Home Page

Collecting and organising data as they come in from various sources.

This repository is for organising our collaboration better: wikis, issues etc.

Python 3.8+ is required to run scripts in this repo.

Vaccination update depends on py-cepimose with a specific subset of Tests for Sledilnik.org

How to run scripts

In this folder run:

  1. python3 -m venv venv or virtualenv -p python3.8 venv
  2. source venv/bin/activate
  3. pip install -r requirements.txt
  4. export COVID_DATA_PATH=<the location of the COVID-DATA folder>
  5. python update.py or python transform/nijz_daily.py or python transform/nijz_weekly.py...

Updating data

Most GitHub:octocat: workflows are scheduled to be ran periodically and can also be triggered manually on the Actions page.

Old alternative: Trigger rebuild at Travis CI

Changelog

2020-04-28

  • stats.csv: rename cases.active.todate to cases.active issue #11

2020-04-26

  • stats.csv: added tests.regular.* and tests.ns-apr20.* to separate tests for National Survey April 2020
  • stats.csv: changed tests.positive.* to report positive actual tests (slightly higher than cases.confirmed.*)

2020-04-25

  • dict-municipality.csv: fixed region for Gornja Radgona (was lj - is ms now)

2020-04-20

  • dict-age-groups.csv: age groups with population (total, male, female)

2020-04-18

  • dict-retirement_homes.csv: added tax-id for each retirement home
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