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IBM / Fhir

Licence: apache-2.0
The IBM® FHIR® Server and related projects

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IBM FHIR Server

The IBM® FHIR® Server is a modular Java implementation of version 4 of the HL7 FHIR specification with a focus on performance and configurability.

For a detailed description of FHIR conformance, see https://ibm.github.io/FHIR/Conformance.

The server can be packaged as a set of jar files, a web application archive (war), an application installer, or a Docker image.

Running the IBM FHIR Server

The IBM FHIR Server is available from the Releases tab as a zip file with installation scripts for Mac/Linux and Windows or as a docker image at https://hub.docker.com/r/ibmcom/ibm-fhir-server.

Note: The Docker image ibmcom/ibm-fhir-schematool is an early technology preview and is experimental.

More information on installing and running the server is available in the User Guide at https://ibm.github.io/FHIR/guides/FHIRServerUsersGuide.

Building on top of the IBM FHIR Server Modules

Each of the IBM FHIR Server modules are published to a public Maven repository on JFrog Bintray.

To use the artifacts from a Maven project:

  1. Add the repository to your pom.xml:

    <repositories>
        <repository>
            <id>ibm-fhir</id>
            <url>https://dl.bintray.com/ibm-watson-health/ibm-fhir-server-releases</url>
        </repository>
        ...
    
  2. Declare the dependencies:

    For example, to use our visitable, thread-safe FHIR R4 object model (including our high-performance parsers and generators), declare a dependency on the fhir-model module:

    ...
    <dependencies>
        <dependency>
          <groupId>com.ibm.fhir</groupId>
          <artifactId>fhir-model</artifactId>
          <version>${fhir.version}</version>
        </dependency>
        ...
    

IBM FHIR Server Module Catalog

The IBM FHIR Server is modular and extensible. The following tables provide an overview of all the IBM FHIR modules, along with an indicator of the stability of the Java APIs defined in each module. This indicator is only applicable to the direct usage of the modules, not for usage of the IBM FHIR Server as a whole.

Core

Module Description Java API-stable
fhir-parent The parent project for all projects which make up the IBM FHIR Server false
fhir-core Core helpers and utilities false

Model and Profile Support

Module Description Java API-stable
fhir-model An object model generated from the FHIR R4 specification and corresponding parsers and generators for XML and JSON true
fhir-registry A resource registry, registry provider interfaces, and pre-registered resources shipped with the FHIR specification false
fhir-term A terminology service provider interface with a default implementation that implements terminology services from fully-defined CodeSystems in the registry false
fhir-profile Helper methods for validating ValueSet membership and Profile conformance false
fhir-path An implementation of version 2.0.0 of the FHIRPath specification assumed by FHIR R4 false
fhir-validation Validation utility for validating resource instances against the base specification and/or configured profiles false
fhir-ig-us-core A packaging of the US Core Implementation Guide for extending the IBM FHIR Server with US Core Profile validation false
fhir-ig-mcode A packaging of the minimal Common Oncology Data Elements for extending the IBM FHIR Server with minimal Common Oncology Data Elements Profile validation false
fhir-ig-carin-bb A packaging of the Consumer-Directed Payer Data Exchange Guide for extending the IBM FHIR Server with Consumer-Directed Payer Data Exchange Profile validation false
fhir-ig-davinci-pdex A packaging of the Da Vinci Payer Data Exchange (PDEX) Implementation Guide for extending the IBM FHIR Server with DaVinci Payer Data Exchange (PDEX) Profile validation false
fhir-ig-davinci-hrex A packaging of the Da Vinci Health Record Exchange (HREX) Implementation Guide for extending the IBM FHIR Server with DaVinci Health Record Exchange (HREX) Profile validation false
fhir-ig-davinci-pdex-plan-net A packaging of the Da Vinci Payer Data Exchange (PDEX) Plan Net Implementation Guide for extending the IBM FHIR Server with DaVinci Payer Data Exchange (PDEX) Plan Net Profile validation false
fhir-ig-davinci-pdex-formulary A packaging of the Da Vinci Payer Data Exchange (PDex) US Drug Formulary Implementation Guide for extending the IBM FHIR Server with DaVinci Payer Data Exchange (PDex) US Drug Formulary validation false

Server

Module Description Java API-stable
fhir-config Configuration property definitions and helpers for working with the fhir-server-config.json config files and multi-tenancy false
fhir-audit Audit-related interfaces and implementations including 1) a No-op AuditLogService and 2) an AuditLogService that writes audit events to Apache Kafka in the Cloud Auditing Data Federation (CADF) JSON format false
fhir-search Utilities for working with the FHIR search specification false
fhir-persistence Interfaces, helpers, and tests for implementing a persistence layer or persistence interceptors for the IBM FHIR Server false
fhir-persistence-schema Classes for deploying and updating the IBM FHIR Server relational database schema false
fhir-persistence-jdbc A relational FHIRPersistence implementation that uses JDBC to store and query FHIR resources false
fhir-persistence-scout A scale out persistence layer to store and query FHIR resources experimental false
fhir-persistence-proxy A custom XADataSource implementation for managing distributed transactions across multiple backends false
fhir-provider JAX-RS Providers for FHIR XML and JSON and related patch formats false
fhir-notification Subscription and notification interfaces and helpers false
fhir-notification-websocket A fhir-notification implementation that uses WebSockets as described at https://www.hl7.org/fhir/R4/subscription.html#2.46.7.2 false
fhir-notification-kafka An experimental fhir-notification implementation that uses Apache Kafka instead of WebSockets false
fhir-notification-nats An experimental fhir-notification implementation that uses NATS instead of WebSockets false
fhir-server JAX-RS resources and related classes for implementing the FHIR REST API and extended operations false
fhir-server-webapp A web application that packages the fhir-server with a set of built-in extended operations false
fhir-server-test End-to-end integration tests for testing a running server false

Extended Operations

Module Description Java API-stable
fhir-operation-test Sample operations for testing Extended Operations as describe at https://www.hl7.org/fhir/R4/operations.html false
fhir-operation-apply A naive implementation of the $apply operation defined at https://www.hl7.org/fhir/operation-activitydefinition-apply.html false
fhir-operation-bulkdata $import and $export implementations which translate bulk data requests into JSR352 Java Batch jobs false
fhir-bulkdata-webapp Standalone web application for serving bulk import and export requests via JSR352 Java Batch jobs false
fhir-operation-convert A limited implementation of the FHIR $convert operation, able to convert between JSON and XML but not between FHIR versions false
fhir-operation-document Basic support for the Composition $document operation defined at https://www.hl7.org/fhir/operation-composition-document.html false
fhir-operation-healthcheck The $healthcheck operation checks for a valid connection to the database and returns the server status false
fhir-operation-term Terminology service operations which use the default fhir-term TerminologyServiceProvider to implement $expand, $lookup, $subsumes, $closure, $validate and $translate false
fhir-operation-validate An implementation of the FHIR resource $validate operation false
fhir-operation-everything An implementation of the FHIR patient $everything operation false

Client

Module Description Java API-stable
fhir-client A FHIR Client that re-uses the IBM FHIR Server model and its JAX-RS Providers false
fhir-cli Experimental command line interface utility for working with the IBM FHIR Server client from the command line false

Tools and Utilities

Module Description Java API-stable
fhir-tools Code generation tools and logic for generating the FHIR object model, XML and JSON parsers, and the DefaultVisitor base class false
fhir-database-utils Generic database utilities for working with Apache Derby and IBM Db2 relational database management systems false
fhir-examples-generator A utility for generating resource examples which range from minimal (only required fields) to complete (every field present) false
fhir-examples A set of FHIR resource examples including 1) all examples from the FHIR Specification 2) a set of generated examples for test purposes false
fhir-swagger-generator Utilities for generating Swagger 2.0 and OpenAPI 3.0 definitions for a subset of the FHIR HTTP interface false
fhir-openapi A web application that provides a simplified OpenAPI 3.0 definition of the FHIR HTTP interface false
fhir-install Packaging and installation scripts for creating the fhir-distribution zip and the corresponding IBM FHIR Server Docker image false
fhir-benchmark Java Microbenchmark Harness (JMH) tests for measuring read/write/validation performance for the IBM FHIR Server and the HL7 FHIR Java Reference Implementation false
fhir-bucket Scans cloud object storage buckets and uploads data using the FHIR REST API false

Contributing to the IBM FHIR Server

The IBM FHIR Server is under active development. To help develop the server, clone or download the project and build it using Maven. See Setting up for development for more information.

See CONTRIBUTING.md for contributing your changes back to the project.

See CODE_OF_CONDUCT.md for code of conduct.

License

The IBM FHIR Server is licensed under the Apache 2.0 license. Full license text is available at LICENSE.

FHIR® is the registered trademark of HL7 and is used with the permission of HL7. Use of the FHIR trademark does not constitute endorsement of this product by HL7. IBM and the IBM logo are trademarks of International Business Machines Corporation, registered in many jurisdictions worldwide. Other product and service names might be trademarks of IBM or other companies. A current list of IBM trademarks is available on https://ibm.com/trademark.

Note that the project description data, including the texts, logos, images, and/or trademarks, for each open source project belongs to its rightful owner. If you wish to add or remove any projects, please contact us at [email protected].