reg-genRegulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.
Stars: ✭ 64 (+300%)
Mutual labels: bioinformatics
awesome-geneticsA curated list of awesome bioinformatics software.
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Mutual labels: bioinformatics
MSFraggerUltrafast, comprehensive peptide identification for mass spectrometry–based proteomics
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Mutual labels: bioinformatics
chromapFast alignment and preprocessing of chromatin profiles
Stars: ✭ 93 (+481.25%)
Mutual labels: bioinformatics
block-alignerSIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.
Stars: ✭ 58 (+262.5%)
Mutual labels: bioinformatics
pathway-mapperPathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
Stars: ✭ 47 (+193.75%)
Mutual labels: bioinformatics
BioKEENA computational library for learning and evaluating biological knowledge graph embeddings
Stars: ✭ 41 (+156.25%)
Mutual labels: bioinformatics
matamMapping-Assisted Targeted-Assembly for Metagenomics
Stars: ✭ 18 (+12.5%)
Mutual labels: bioinformatics
TypeTEGenotyping of segregating mobile elements insertions
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Mutual labels: bioinformatics
bistroA library to build and execute typed scientific workflows
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Mutual labels: bioinformatics
epivizEpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding of correlations between various genome features.
Stars: ✭ 65 (+306.25%)
Mutual labels: bioinformatics
netSmoothnetSmooth: A Network smoothing based method for Single Cell RNA-seq imputation
Stars: ✭ 23 (+43.75%)
Mutual labels: bioinformatics
motifmatchrFast motif matching in R
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Mutual labels: bioinformatics
perbasePer-base per-nucleotide depth analysis
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Mutual labels: bioinformatics
polyRADGenotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
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Mutual labels: bioinformatics
geneviewGenomics data visualization in Python by using matplotlib.
Stars: ✭ 38 (+137.5%)
Mutual labels: bioinformatics
react-msa-viewerReact rerelease of MSAViewer
Stars: ✭ 15 (-6.25%)
Mutual labels: bioinformatics
AMIDDIntroduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)
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Mutual labels: bioinformatics
programmingforpsychA textbook for programming techniques for experiment creation and data-analysis
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Mutual labels: oer
calourexploratory and interactive microbiome analyses based on heatmaps
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Mutual labels: bioinformatics