GenometoolsGenomeTools genome analysis system.
Stars: ✭ 186 (+389.47%)
Mutual labels: annotation, genomics
Vcfannoannotate a VCF with other VCFs/BEDs/tabixed files
Stars: ✭ 259 (+581.58%)
Mutual labels: annotation, genomics
phastafIdentify phage regions in bacterial genomes for masking purposes
Stars: ✭ 22 (-42.11%)
Mutual labels: genomics, phage
DramDistilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
Stars: ✭ 47 (+23.68%)
Mutual labels: annotation, genomics
bac-genomics-scriptsCollection of scripts for bacterial genomics
Stars: ✭ 39 (+2.63%)
Mutual labels: annotation, genomics
DRAMDistilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
Stars: ✭ 159 (+318.42%)
Mutual labels: annotation, genomics
companionThis repository has been archived, currently maintained version is at https://github.com/iii-companion/companion
Stars: ✭ 21 (-44.74%)
Mutual labels: annotation, genomics
CAMSACAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
Stars: ✭ 18 (-52.63%)
Mutual labels: genomics
napari.github.iowebsite for the napari image viewer
Stars: ✭ 43 (+13.16%)
Mutual labels: annotation
TextGridToolsRead, write, and manipulate Praat TextGrid files with Python
Stars: ✭ 84 (+121.05%)
Mutual labels: annotation
switchdeInference of switch-like differential expression along single-cell trajectories
Stars: ✭ 19 (-50%)
Mutual labels: genomics
redcoatA lightweight web-based annotation tool for labelling entity recognition data.
Stars: ✭ 19 (-50%)
Mutual labels: annotation
bacnetBACNET is a Java based platform to develop website for multi-omics analysis
Stars: ✭ 12 (-68.42%)
Mutual labels: genomics
delsePyTorch code for Deep Extreme Level Set Evolution (CVPR 2019)
Stars: ✭ 62 (+63.16%)
Mutual labels: annotation
annotation-processor-sampleAn annotation processor which implements "Builder pattern" for your java classes.
Stars: ✭ 22 (-42.11%)
Mutual labels: annotation
mcscanCommand-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format
Stars: ✭ 18 (-52.63%)
Mutual labels: genomics
viralrecallDetection of NCLDV signatures in 'omic data
Stars: ✭ 15 (-60.53%)
Mutual labels: genomics
mccortexDe novo genome assembly and multisample variant calling
Stars: ✭ 105 (+176.32%)
Mutual labels: genomics
EarlGreyEarl Grey: A fully automated TE curation and annotation pipeline
Stars: ✭ 25 (-34.21%)
Mutual labels: genomics