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All Projects → Sentieon → sentieon-scripts

Sentieon / sentieon-scripts

Licence: BSD-2-Clause license
Helper scripts for biological data processing from Sentieon

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Sentieon-scripts

Helper scripts for biological data processing from Sentieon

Available scripts

  • Example Pipelines - Example Sentieon pipelines implemented in shell script.
  • Memest - Memory usage estimation for Sentieon variant callers from a BAM header and index (.bai) files.
  • MNP - Merge neighboring variants along the same haplotype from Sentieon somatic variant callers into multi-nucleotide polymorphisms (MNPs).
  • TNscope Filter - TNscope filter implemented in python script.

License

Unless otherwise indicated, files in this repository are licensed under a BSD 2-Clause License.

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