239 Open source projects that are alternatives of or similar to vcf2tsv

A set of Unix shell command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, tsv, csv, or flat data file format) with a header line. Provides column reference by name, automatic delimiter and compression detection for per-line transformations, sql-like group-by operation and relational join.

Annotation of VCF variants with functional impact and from databases (executable+library)

A list of command line tools for manipulating structured text data

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A handy variant calling pipeline generator for whole genome re-sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.

Geometric conversions between different formats and projections

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simple viewer for variant call format using htslib

calcardbackup: moved to https://codeberg.org/BernieO/calcardbackup

Open Geospatial Datasets for GIS Education: This is a repository of open geospatial datasets to be used in an educational context. I created these files over years of teaching Geographic Data Science and GIS. All original datasets are freely available online with open data licenses (see the dataset attribution for details). All the datasets in t…

A phenotype-based tool for variant prioritization in WES and WGS data

BIDScoin converts your source-level neuroimaging data to BIDS

The smallest & fastest library for really easy, totally type-safe unit conversions in TypeScript & JavaScript.

Powerful statistics for VCF files

A global host of tools used to mod/parse Project DIVA games.

An advanced image conversion server and command line tool.

📊Evaluating, filtering, comparing, and visualising VCF

Stateless microservice for on-the-fly thumbs and conversions of a wide variety of file types, utilizing conversion graph.

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Node.js module to format big uint numbers from a byte array or a Buffer

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e-magyar text processing system -- inter-module communication via tsv + REST API

Mirror of Gitlab Repository

A JS money lib whose precision goes up to 11 (and beyond).

find large indels (in the blind spot between GATK/freebayes and SV callers)

The popular GPS conversion and editing tool

A small library for coercion to primitive Erlang types.

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tools for reading, writing, merging, and remapping SNPs

Learning the Variant Call Format

MTGJSON build scripts to generate alternative data formats

A simple tool to convert qt translation file (ts) to other format (xlsx / csv) and vice versa

A Python Wrapper of Pngquant

A novel management, annotation, and machine learning framework for analyzing cancer mutations

RDF2X converts big RDF datasets to the relational database model, CSV, JSON and ElasticSearch.

一个CTF+渗透测试工具框架,集成常见加解密，密码、编码转换，端口扫描，字符处理等功能

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

Time(ing) library (Instant/Duration/Clock/Timer/Period/Frequency) for bare-metal embedded systems

Simple command line tool for unit conversions

A cross platform tool to convert images to c64 format.

Generates an image from a DOM node using HTML5 canvas

Spark VCF data source implementation for Dataframes

Highly scalable html conversion using electron workers 🚀

A lightweight library that converts raw HTML to a React DOM structure.

C# library which provides uniform API for conversion between types.

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Cancer Predisposition Sequencing Reporter (CPSR)

Java SDK for downloading large gzipped (tsv) item feed files and applying filters for curation

convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations

Frequently used commands in bioinformatics

Conversion between scRNA-seq objects

Android dimension types as inline classes with easy conversions.