1. KmcFast and frugal disk based k-mer counter
2. FAMSAAlgorithm for large-scale multiple sequence alignments (400k proteins in 2 hours and 8GB of RAM)
4. agcAssembled Genomes Compressor
5. PHISTPhage-Host Interaction Search Tool
6. kmer-dbKmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.).