wanwanbeen / Ct_lung_segmentation
Licence: mit
Robust segmentation of lung and airway in CT scans
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CT Lung Segmentation
This repository contains the codes for lung and airway segmentation from CT scans, used in "Discriminative Localization in CNNs for Weakly-Supervised Segmentation of Pulmonary Nodules", MICCAI'17.
Files
-
demo_ct_lung_segment.ipynb: demo code to walk through the steps implementated inmain.py. -
main.py: main code of the segmentation. -
segment_lung.py: coarse segmentation of lung & airway. -
segment_airway.py: extraction of airway. -
utils.py: utility functions. -
data: input sample. -
result: output sample.
Note: the sample image is down-sampled from a CT scans in the LIDC-IDRI dataset.
Requirements
- numpy
- nibabel
- scipy
- scikit-image
Usage
$ git clone https://github.com/wanwanbeen/ct_lung_segmentation
$ cd ct_lung_segmentation
$ python main.py
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