binMy bioinfo toolbox
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Mutual labels: ngs, fastq
ngs pipelineExome/Capture/RNASeq Pipeline Implementation using snakemake
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Mutual labels: ngs, fastq
readfqA simple tool to calculate reads number and total base count in FASTQ file
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Mutual labels: ngs, fastq
fastq utilsValidation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
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Mutual labels: ngs, fastq
myVCFmyVCF: a web-based platform for target and exome mutations data management
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Mutual labels: ngs
PairfqSync paired-end FASTA/Q files and keep singleton reads
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Mutual labels: fastq
Circle-MapA method for circular DNA detection based on probabilistic mapping of ultrashort reads
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Mutual labels: ngs
fqCommand line utility for manipulating Illumina-generated FastQ files.
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Mutual labels: fastq
disqA library for manipulating bioinformatics sequencing formats in Apache Spark
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Mutual labels: ngs
bac-genomics-scriptsCollection of scripts for bacterial genomics
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Mutual labels: ngs
needlestackMulti-sample somatic variant caller
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Mutual labels: ngs
CliqueSNVNo description or website provided.
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Mutual labels: ngs
bio-dockers🐳 Bio-dockers: dockerized bioinformatic tools
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Mutual labels: ngs
angsd-wrapperUtilities for analyzing next generation sequencing data.
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Mutual labels: ngs
ngs-preprocessA pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
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Mutual labels: ngs
BWA-MEMEFaster BWA-MEM2 using learned-index
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Mutual labels: ngs
grape-nfAn automated RNA-seq pipeline using Nextflow
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Mutual labels: ngs
STingUltrafast sequence typing and gene detection from NGS raw reads
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Mutual labels: ngs
asapA scalable bacterial genome assembly, annotation and analysis pipeline
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Mutual labels: ngs
alignment-nfWhole Exome/Whole Genome Sequencing alignment pipeline
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Mutual labels: ngs
