This package will soon be no longer or only very sparsely maintained in favor of deeptime.
MSMTools
What is it?
msmtools is an open source collection of algorithms for the estimation and analysis of discrete state space Markov chains via Markov state models (MSM).
The algorithms are implemented using NumPy and SciPy.
Installation
With pip:
pip install msmtools
with conda:
conda install -c conda-forge msmtools
or install latest devel branch with pip:
pip install git+https://github.com/markovmodel/msmtools.git@devel
Support and development
For bug reports/suggestions/complains please file an issue on GitHub.
Or start a discussion on our mailing list: [email protected]