GitPlanet

Cheap and reliable Node.js hosting starts at $3/month, and $1/month static HTML hosting

Created with love in Canada, visit hostnodejs.com today

Feel like to post an Ad? Learn Details
All Projects → BioContainers → workflows

BioContainers / workflows

Licence: Apache-2.0 license
Bioinformatics curated workflows that use Biocontainers tools

Labels

bioinformaticsbioinformatics-pipelineworkflows

Projects that are alternatives of or similar to workflows

life-disciplines-projects
Life-Disciplines-Projects (LDP) is a life-management framework built within Obsidian. Feel free to transform it for your own personal needs.
Stars: ✭ 130 (+622.22%)
Mutual labels:  workflows
dolphinnext
A graphical user interface for distributed data processing of high throughput genomics
Stars: ✭ 92 (+411.11%)
Mutual labels:  workflows
bigflow
A Python framework for data processing on GCP.
Stars: ✭ 96 (+433.33%)
Mutual labels:  workflows
recent-activity
Add your recent activity to your profile readme!
Stars: ✭ 87 (+383.33%)
Mutual labels:  workflows
Convenience
.NET Core 5/Angular11/NG-ZORRO 权限管理系统 工作流系统
Stars: ✭ 74 (+311.11%)
Mutual labels:  workflows
ENIGMA
The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠
Stars: ✭ 66 (+266.67%)
Mutual labels:  workflows
poc-github-actions
Various proofs of concept examples using Github Actions 🤖
Stars: ✭ 103 (+472.22%)
Mutual labels:  workflows
assembly improvement
Improve the quality of a denovo assembly by scaffolding and gap filling
Stars: ✭ 46 (+155.56%)
Mutual labels:  bioinformatics-pipeline
postier
Postier is a Laravel API automation platform to transfer data and to sync apps. You can build workflows with data and actions of multiple apps and apply logics to the data!
Stars: ✭ 55 (+205.56%)
Mutual labels:  workflows
steep
⤴️ Steep Workflow Management System – Run scientific workflows in the Cloud
Stars: ✭ 30 (+66.67%)
Mutual labels:  workflows
gubbins
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Stars: ✭ 103 (+472.22%)
Mutual labels:  bioinformatics-pipeline
Efficient-office
Alfred-Workflows，Vim，Script，Mac
Stars: ✭ 36 (+100%)
Mutual labels:  workflows
changed-files
Github action to retrieve all (added, copied, modified, deleted, renamed, type changed, unmerged, unknown) files and directories.
Stars: ✭ 733 (+3972.22%)
Mutual labels:  workflows
action-github-workflow-sync
Github Action To Sync Github Action's Workflow Files Across Repositories
Stars: ✭ 51 (+183.33%)
Mutual labels:  workflows
org
📜 📒 Place for organization guidelines and workflows
Stars: ✭ 22 (+22.22%)
Mutual labels:  workflows
snp-sites
Finds SNP sites from a multi-FASTA alignment file
Stars: ✭ 182 (+911.11%)
Mutual labels:  bioinformatics-pipeline
cli
Polyaxon Core Client & CLI to streamline MLOps
Stars: ✭ 18 (+0%)
Mutual labels:  workflows
TEs genes relationship pipeline
Distribution of TEs and their relationship to genes in host genome
Stars: ✭ 13 (-27.78%)
Mutual labels:  bioinformatics-pipeline
tideflow
Building extensible automation. Tideflow is a Realtime, open source workflows execution and monitorization web application.
Stars: ✭ 101 (+461.11%)
Mutual labels:  workflows
primrose
Primrose modeling framework for simple production models
Stars: ✭ 33 (+83.33%)
Mutual labels:  workflows
View All Similar Projects ➔

Workflows

The following repo containers a list of workflows that use BioContainers tools. All the workflows should be published in github.The user should provide for each workflow the following fields:

  • GitHub repo*
  • Author name*
  • Short name (Optional if provided in the repo)
  • Short description (Between 50-200 characters). (Optional inf provided in the repo)
  • License (Optional if provided in the repo).
  • Type (NF, CWL, SN)

How to contribute

Please fork the following repo and edit the workflows.csv file and perform a Pull Request.

Accepted Workflow Engines

Note that the project description data, including the texts, logos, images, and/or trademarks, for each open source project belongs to its rightful owner. If you wish to add or remove any projects, please contact us at [email protected].