657 Open source projects that are alternatives of or similar to bacannot

BACTpipe: An assembly and annotation pipeline for bacterial genomics

Example workflows for the drake R package

Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

An R-focused pipeline toolkit for reproducibility and high-performance computing

Curated set of transformers that make your work with steppy faster and more effective 🔭

Short course on the targets R package

A DSL for data-driven computational pipelines

Function-oriented Make-like declarative workflows for R

Lightweight, Python library for fast and reproducible experimentation 🔬

This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion

A minimal example data analysis project with the targets R package

A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies

A library for creating and curating reproducible pipelines for scientific and industrial machine learning

Open solution to the Google AI Object Detection Challenge 🍁

This code is used to build & run a Docker container for performing predictions against a Spark ML Pipeline.

Make it possible to chain regular functions

Catalyst.Classification

Track changes in data with ease

RNA-seq analysis pipeline for detection gene-fusions

This module allows a developer to upload SAPUI5/OpenUI5 sources into a SAP NetWeaver ABAP system.

just annotate it, dammit!

Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis

Google Classroom Data Pipeline

Reproducible Self-Publishing - Demo Publications in the Most Common Formats

tfa is a 2fa cli tool that aims to help you to generate 2fa code on CI/CD pipelines.

Annotation hints for the Hotspot JVM JIT compiler.

Rmarkdown templates for reproducible science

CloudCV GSoC 2021 Ideas

R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.

No description or website provided.

🚀 Automate versioning, changelog creation, README updates and GitHub releases using GitHub Actions,npm, docker or bash.

A curated collection of publicly available resources on how companies around the world practice DevOps

Toolbox for deep, resilient, markup-invariant linking into HTML documents without their cooperation

Continuous Integration Platform

Long read / genome alignment software

A tool allows you to draw on screen real-time.

NOTE: This repo is archived. Please see https://github.com/benmarwick/rrtools for my current approach

Use AutoAI to detect fraud

API spec validator and OpenAPI document generator for Python web frameworks.

在 Hibernate 中如何配置多表关系映射，包括：一对一、一对多和多对多。

Fun functional programming with pipelinable functions

Node & Express Demo App for Azure DevOps

🔥 One of the most comprehensive open-source data annotation platform.

Python module for data scientists for quick creating annotation projects.

A simple annotation component.

A pure bash clojureish CI pipeline

Project to set up basics of a Java annotation processor

🔬 De novo assembly of nanopore reads using nextflow

javascript implementation of annotations using fragmention

Pytorch Implementation of GoEmotions 😍😢😱

A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using coalescent and concatenation approaches

The Rx Asset Management System for motion picture production

A lightweight, distributed workflow system

A library to facilitate machine learning on multi-dimensional images.

List of IARC bioinformatics nextflow pipelines

Towhee is a framework that is dedicated to making neural data processing pipelines simple and fast.

IMS Machine Learning Lab publications.

Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.

🇨🇳 MyDataHarbor是一个致力于解决任意数据源到任意数据源的分布式、高扩展性、高性能、事务级的数据同步中间件。帮助用户可靠、快速、稳定的对海量数据进行准实时增量同步或者定时全量同步，主要定位是为实时交易系统服务，亦可用于大数据的数据同步（ETL领域）。

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances