1605 Open source projects that are alternatives of or similar to Fastq.bio

A package for designing compact and comprehensive capture probe sets.

A tool to circularize genome assemblies

A collection of publications on comparison of high-throughput sequencing technologies.

Antimicrobial Resistance Identification By Assembly

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

Official code repository for GATK versions 4 and up

Data intensive science for everyone.

Genomics Extension for SQLite

Framework for building fast genomics web tools with WebAssembly and WebWorkers

A collection of scripts and notes related to genomics and bioinformatics

Intuitive local web frontend for the BLAST bioinformatics tool

Assembling the cause of phenotypes and genotypes from NGS data

Rapid large-scale prokaryote pan genome analysis

SaffronTree: Reference free rapid phylogenetic tree construction from raw read data

Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.

Analysis pipelines for sequencing data

🌐 Superpowered Web Audio JavaScript and WebAssembly SDK for modern web browsers. Allows developers to implement low-latency interactive audio features into web sites and web apps with a friendly Javascript API. https://superpowered.com

Web Assembly to Kotlin and Java converter. Allows to compile a C or C++ program/library, and generate a Kotlin or Java program/library.

Composable data visualisation library for web with a data-first approach now powered by WebAssembly

[WIP] A Pythonesque language with a design that focuses on efficiency and expressiveness. Compiles to WebAssembly

Efficient variant-call data storage and retrieval library using the TileDB storage library.

Flexible genotype query among 30,000+ samples whole-genome

🎮 Game Boy emulator written in Rust

WebAssembly(wasm)资源精选

highly-efficient & lightweight mutation signature matrix aggregation

Markdown parser and HTML generator implemented in WebAssembly, based on md4c

[ORPHANED] A small toolkit for converting wasm binaries into json and back.

😠⚔️😈 A minimalistic 2D turn-based tactical game in Rust

🐳 dockerdot shows dockerfile dependenciy graph. This is useful to understand how build dockerfile. This uses Go WebAssembly + BuildKit package.

Template and example projects for Fastly Labs Terrarium https://wasm.fastlylabs.com

** Bionic - An Ionic CLI clone for Blazor projects ** moved to:

wagon, a WebAssembly-based Go interpreter, for Go.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

NoteCalc is a handy calculator trying to bring the advantages of Soulver to the web.

🐍🕸 WebAssembly runtime for Python

✂️Automatically determine where to crop a circular image out of a rectangular.

TypeScript / JavaScript library for detect WebAssembly features in node.js & browser

Browser hacks to disable WebAssembly (WASM)

🐘🕸️ WebAssembly runtime for PHP

Pure Go implementation of the WebRTC API

Import and use wasm in node

📚 WebAssembly friendly programming with C/C++ -- Emscripten practice

Main repository for the Veracruz privacy-preserving compute project.

⚡ Rust/WebAssembly image processing library

Game Boy / Game Boy Color Emulator Library, 🎮written for WebAssembly using AssemblyScript. 🚀Demos built with Preact and Svelte. ⚛️

Blazor WASM, IdentityServer4, Kestrel Web Server, Entity Framework Code First SQLite Database with Multiple Roles, Additional User Claims & gRPC with Roles Authorization.

WebAssembly sort algorithms compiled by C.

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

Write HTTP handlers in WebAssembly with a minimal amount of work

Generate excel file from json data

🦀 + 🕸 + 🦊 // A web-extension to reverse a string. Yep.

Go compiler for small places. Microcontrollers, WebAssembly (WASM/WASI), and command-line tools. Based on LLVM.

Rhai - An embedded scripting language for Rust.

HTS-compatible wrapper for IgBlast V-(D)-J mapping tool