314 Open source projects that are alternatives of or similar to Reproducibilidad

Short course on reproducible science: what, why, how

Data Analysis Workflows & Reproducibility Learning Resources

rrtools: Tools for Writing Reproducible Research in R

ukbREST: efficient and streamlined data access for reproducible research of large biobanks

Software Papers as Software Modules: Towards a Culture of Reusable Results

A curated list of reproducible research case studies, projects, tutorials, and media

NOTE: This repo is archived. Please see https://github.com/benmarwick/rrtools for my current approach

Open source production model management tool for data scientists

Examples and demos for ReproZip

VisTrails is an open-source data analysis and visualization tool. It provides a comprehensive provenance infrastructure that maintains detailed history information about the steps followed and data derived in the course of an exploratory task: VisTrails maintains provenance of data products, of the computational processes that derive these products and their executions.

Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.

Pythonic functions for creating and enhancing Hydra applications

ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.

Reproducible Data Science in Python (SciPy 2019 Tutorial)

Render bits of R code for sharing, e.g., on GitHub or StackOverflow.

Workflow Description Language - Specification and Implementations

🐳 Containerize R Markdown documents for continuous reproducibility

Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts

WingsBoot=BKB+飞鞋+SpringBoot。其核心价值是：①使团队快速实现业务目标；②快速偿还技术债务；③安全的面向程序和业务重构。

PyTorch Lightning + Hydra. A very user-friendly template for rapid and reproducible ML experimentation with best practices. ⚡🔥⚡

A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.

With this plugin, you can use a github/gitlab repository for keeping your OctoPrint Files collection up-to-date.

Capture all information throughout your model's development in a reproducible way and tie results directly to the model code!

A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies

Tutorial for converting markdown files in to APA-formatted docs, based on my workflow.

Git with less typing

Empirical Software Engineering journal (EMSE) open science and reproducible research initiative

Extra-strength glue engines for R Markdown and Quarto

An awesome rmarkdown related package collection

asabeneh.github.io/10-days-of-git-and-github/

Reproducible research and reusable acyclic workflows in Python. Execute code on HPC systems as if you executed them on your personal computer!

An R package for building xaringan slides into multiple outputs, including html, pdf, png, gif, pptx, and mp4.

Experiments logging & visualization

🔨 Gitian Building made simpler on any Windows Debian/Ubuntu MacOS with Vagrant, lxc, and virtualbox

R Markdown Beamer Theme Based on sthlm, HSRM, and Metropolis themes

manage versions of Blender documents using Git

A workshop format for rmarkdown. Releases contain locations in chronological order

Fully reproducible, open source scientific articles in LaTeX.

The collaboration workspace for Machine Learning

Deploy a BinderHub from scratch on Microsoft Azure

CSSS508: Introduction to R for Social Scientists

🖧 Quads in Git - Distributed Version Control for RDF Knowledge Bases

A collection of portable workflows, automation recipes and components for MLOps in a unified CK format. Note that this repository is outdated - please check the 2nd generation of the CK workflow automation meta-framework with portable MLOps and DevOps components here:

Create Easily Canvas in Shiny and RMarkdown Documents

Provides an immutable, thread-safe, and semantic version type.

Portable automation meta-framework to manage, describe, connect and reuse any artifacts, scripts, tools and workflows on any platform with any software and hardware in a non-intrusive way and with minimal effort. Try it using this tutorial to modularize and automate ML Systems benchmarking from the Student Cluster Competition at SC'22:

Coding Standards for the USC Biostats group

Programming with R

Clean Jupyter notebooks of outputs, metadata, and empty cells, with Git integration

R data products: Reports, Presentations, Apps, and API's

⛔ ARCHIVED ⛔

A Distributed Version Control System with a Friendly UI

Configurable automatic or real time backup and personal versioning system

An R Markdown template using the bookdown package for preparing a PhD thesis at the University of Washington

R package for Rmarkdown for creating autocheck questions and hints

WIP (properly) version control and collaborate on your *.pbi{tx} files

A wrapper for Git to sanctify your version control workflow. ✝️

D-Lab's 3 hour introduction to basic Bash commands and using version control with Git and Github.

Functions to Embed Video in HTML

RMarkdown Template for writing PDF reports