All Git Users → dnbaker

6 open source projects by dnbaker

1. Dashing
Fast and accurate genomic distances using HyperLogLog
✭ 131
indexing
2. Sketch
C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings
4. minicore
Fast and memory-efficient clustering + coreset construction, including fast distance kernels for Bregman and f-divergences.
5. dashing2
Dashing 2 is a fast toolkit for k-mer and minimizer encoding, sketching, comparison, and indexing.
6. bonsai
Bonsai: Fast, flexible taxonomic analysis and classification
1-6 of 6 user projects