1. Deseq2Differential gene expression analysis based on the negative binomial distribution
3. AsthmaRNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
4. tximetaTranscript Quantification Import with Automatic Metadata
5. tximportImport and summarize transcript-level estimates for gene-level analysis
6. alpineModeling and correcting fragment sequence bias for RNA-seq