9 open source projects by pachterlab

Differential analysis of RNA-Seq

Near-optimal RNA-Seq quantification

No description, website, or topics provided.

A tool to find sequencing data and metadata from public databases.

Bioinformatics for Benched Biologists

Reference transcriptome indices build from kallisto for popular organisms

Code for performing PCA followed by CCA

kallisto | bustools workflow for pre-processing single-cell RNA-seq data

Using kallisto for metagenomic analysis