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→ vpc-ccg
5 open source projects by vpc-ccg
[ Open user page on Github ]
1.
Lordfast
Sensitive and Fast Alignment Search Tool for Long Read sequencing Data.
✭ 35
c
mapping
2.
calib
Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.
✭ 29
HTML
C++
python
shell
Makefile
c
clustering
liquid-biopsy
tagged-reads
barcode-sequencing
paired-end-sequencing
3.
sedef
Identification of segmental duplications in the genome
✭ 22
C++
Jupyter Notebook
python
shell
structural-variation
segmental-duplications
4.
svict
Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA
✭ 21
C++
Makefile
structural-variation
liquid-biopsy
paired-end-sequencing
5.
haslr
A fast tool for hybrid genome assembly of long and short reads
✭ 68
C++
python
c
Makefile
bioinformatics
nanopore
genomics
pacbio
genome-assembly
long-reads
hybrid-assembly
1-5
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5
user projects