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Top 2 debruijn-graph open source projects

An efficient index for the colored, compacted, de Bruijn graph

✭ 94

c C++CMake shell python Jupyter Notebook genome hash index debruijn dbg contigs debruijn-graph

MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.

✭ 30

C++python shell CMake Dockerfile bioinformatics genomics gatb debruijn-graph structural-variants

1-2 of 2 debruijn-graph projects