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Top 3 differential-abundance-analysis open source projects

microbiomeMarker

R package for microbiome biomarker discovery

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r metagenomics microbiome r-package biomarker-discovery lefse differential-abundance-analysis

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

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r TeX correlation sequencing microbiome normalization secom differential-abundance-analysis ancom ancombc ancombc2

MaAsLin2: Microbiome Multivariate Association with Linear Models

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r tools public metagenomics bioconductor repeated-measures microbiome false-discovery-rate biobakery differential-abundance-analysis multiple-covariates

1-3 of 3 differential-abundance-analysis projects