Top 4 long-read-sequencing open source projects

scisorseqr is an R-package for processing of single-cell long read data and analyzing differential isoform expression across any two conditions

DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.

uLTRA is a long-read splice aligner with high accuracy from using a guiding annotation

🍊 💫 Trim, circularise and orient long read bacterial genome assemblies