All Projects → Chemellia → ChemistryFeaturization.jl

Chemellia / ChemistryFeaturization.jl

Licence: MIT license
Interface package for featurizing atomic structures

Programming Languages

julia
2034 projects
python
139335 projects - #7 most used programming language

Projects that are alternatives of or similar to ChemistryFeaturization.jl

GLaDOS
Web Interface for ChEMBL @ EMBL-EBI
Stars: ✭ 28 (-20%)
Mutual labels:  chemistry
lightdock
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Stars: ✭ 110 (+214.29%)
Mutual labels:  chemistry
bioicons
A library of free open source icons for science illustrations in biology and chemistry
Stars: ✭ 665 (+1800%)
Mutual labels:  chemistry
MolecularGraph.jl
Graph-based molecule modeling toolkit for cheminformatics
Stars: ✭ 144 (+311.43%)
Mutual labels:  chemistry
KinBot
Automated reaction pathway search for gas-phase molecules
Stars: ✭ 20 (-42.86%)
Mutual labels:  chemistry
DLBFoam-1.0
DLBFoam: An open-source dynamic load balancing model for fast reacting flow simulations in OpenFOAM. https://doi.org/10.1016/j.cpc.2021.108073
Stars: ✭ 29 (-17.14%)
Mutual labels:  chemistry
hamilton
A scalable general purpose micro-framework for defining dataflows. You can use it to create dataframes, numpy matrices, python objects, ML models, etc.
Stars: ✭ 612 (+1648.57%)
Mutual labels:  featurization
mendeleev
A python package for accessing various properties of elements, ions and isotopes in the periodic table of elements.
Stars: ✭ 107 (+205.71%)
Mutual labels:  chemistry
html-integrations
The official JavaScript library for MathType, the leading formula editor and equation writer for the web by Wiris
Stars: ✭ 36 (+2.86%)
Mutual labels:  chemistry
molassembler
Chemoinformatics toolkit with support for inorganic molecules
Stars: ✭ 18 (-48.57%)
Mutual labels:  chemistry
periodic-table.io
periodic-table.io
Stars: ✭ 37 (+5.71%)
Mutual labels:  chemistry
bioclipse.core
Bioclipse2 Core.
Stars: ✭ 21 (-40%)
Mutual labels:  chemistry
qp2
Quantum Package : a programming environment for wave function methods
Stars: ✭ 37 (+5.71%)
Mutual labels:  chemistry
pylj
Teaching Utility for Classical Atomistic Simulation.
Stars: ✭ 23 (-34.29%)
Mutual labels:  chemistry
SciCompforChemists
Scientific Computing for Chemists text for teaching basic computing skills to chemistry students using Python, Jupyter notebooks, and the SciPy stack. This text makes use of a variety of packages including NumPy, SciPy, matplotlib, pandas, seaborn, NMRglue, SymPy, scikit-image, and scikit-learn.
Stars: ✭ 65 (+85.71%)
Mutual labels:  chemistry
cdk pywrapper
A Python wrapper for the Chemistry Development Kit (CDK)
Stars: ✭ 25 (-28.57%)
Mutual labels:  chemistry
isotope
Haskell library containing isotopic masses and relative abundances for elements from Hydrogen to Bismuth and Thorium and Uranium (excluding Technetium and promethium), i.e., all elements with naturally-occurring isotopes.
Stars: ✭ 17 (-51.43%)
Mutual labels:  chemistry
graph-nvp
GraphNVP: An Invertible Flow Model for Generating Molecular Graphs
Stars: ✭ 69 (+97.14%)
Mutual labels:  chemistry
EzReson
An efficient toolkit for chemical resonance analysis based on quantum chemistry calculations. It implements the quantitative theory of resonance by expansion of the wave function from a DFT/HF calculation in terms of those of the Lewis structures.
Stars: ✭ 14 (-60%)
Mutual labels:  chemistry
chemistry-opencmis
Mirror of Apache Chemistry OpenCMIS
Stars: ✭ 47 (+34.29%)
Mutual labels:  chemistry

ChemistryFeaturization.jl

Run tests codecov Stable Dev

Interface for modular, flexible, invertible featurization of atomic structures for machine learning purposes.

Check out our JuliaCon 2021 talk here! (note that some syntax is out of date)

This package is currently focused on bulk systems. We have plans for more extensive support of organic molecules, but at the moment, MolecularGraph is probably your best bet. PubChem stores many molecular features for the compounds they catalog, and their data can be accessed via PubChemCrawler.

Features

For a fairly extensive tour, check out the tutorial in the docs!

Note that the project description data, including the texts, logos, images, and/or trademarks, for each open source project belongs to its rightful owner. If you wish to add or remove any projects, please contact us at [email protected].