CSV Data on Coronavirus (COVID-19)
This repository contains data in (CSV format) which are scraped from reliable sources (e.g. World Health Organisation).
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Data are scraped a few times daily and pushed back to this repository together with generated charts (.PNG files).
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Look for those CSV direct link below to get the scraped historical data.
Aggregate sites
BNO News
NOTE: paused on 1 Jan 2021
Below are international stats, excluding China.
Bar chart of the latest snapshot.
WHO & Government sites
From WHO (World Health Organisation) Situation reports
NOTE: paused on 16 Jun 2020 due to format changes from WHO.
Data are scraped from these reports which are in PDF formats. New reports are released daily.
Globally confirmed cases
Stats from Australia
NOTE: paused on 10 July 2020
Data is pulled from Department of Health website.
Cases in Australia
Stats from Singapore
Data are scraped from the MOH (Ministry of Health) local situation web page.
Cases in Singapore
NOTE: paused on 27 Jun 2020.
From US CDC (Centers for Disease Control and Prevention)
NOTE: paused on 27 Jun 2020 due to format changes from CDC.
Cases in the US (data are scraped from here)
- Till 18 Apr 2020:
- From 18 Apr 2020, the data format CDC website has been changed to include races and age groups.
- From 7 May 2020,
Stats from China
This page has the realtime stats from China. Data are pulled several times a day by the pipeline.
All cases in China
How it works
- Jupyter notebooks are used for scraping data and output to CSV files
- These notebooks are executed on a schedule by Github Actions pipeline to scrape new data
- This pipeline also commits back new data to this repository
Development
- Tools: Python3, Jupyter, Pandas, BeautifulSoup and related stuff (e.g. Selenium for web-scraping). It is recommended to start the development environment with this docker image, which is also used for the Github Actions build pipeline.
docker run -p 8888:8888 -it -v $PWD:/stats -w /stats alext234/datascience:latest bash
- requirements.txt contains Python dependencies
pip install -r requirements.txt
- Start Jupyter notebook from inside the container and then visit the browser at
http://localhost:8888
jupyter notebook --allow-root --ip=0.0.0.0
Contributions
- Feel free to create new issues for any potential data source worth scraping.
- Pull requests are welcomed!
Repo status and stats
- Stargazers
- Last update from pipeline
- Pipeline status
