LFQ-AnalystThe repo for LFQ-Analyst
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Mutual labels: proteomics, mass-spectrometry
MSFraggerUltrafast, comprehensive peptide identification for mass spectrometry–based proteomics
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Mutual labels: proteomics, mass-spectrometry
pyprophetPyProphet: Semi-supervised learning and scoring of OpenSWATH results.
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Mutual labels: proteomics, mass-spectrometry
pFind3No description or website provided.
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Mutual labels: proteomics, mass-spectrometry
pyqmspyQms, generalized, fast and accurate mass spectrometry data quantification
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Mutual labels: proteomics, mass-spectrometry
RforProteomicsUsing R and Bioconductor packages for the analysis and comprehension of proteomics data.
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Mutual labels: proteomics, mass-spectrometry
QFeaturesQuantitative features for mass spectrometry data
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Mutual labels: proteomics, mass-spectrometry
philosopherA complete toolkit for shotgun proteomics data analysis
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Mutual labels: proteomics, mass-spectrometry
bacnetBACNET is a Java based platform to develop website for multi-omics analysis
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Mutual labels: proteomics
OmicLearn🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data
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Mutual labels: proteomics
OmicsIntegrator2Prize-Collecting Steiner Forests for Interactomes
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Mutual labels: proteomics
cosmosRCOSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.
Stars: ✭ 30 (+25%)
Mutual labels: proteomics
FALDOFeature Annotation Location Description Ontology
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Mutual labels: proteomics
DAtestCompare different differential abundance and expression methods
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Mutual labels: proteomics
IDBacAppA MALDI Mass Spectrometry Bioinformatics Platform
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Mutual labels: mass-spectrometry
rawDiagBrings Orbitrap Mass Spectrometry Data to Life; Multi-platform, Fast and Colorful R package.
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Mutual labels: mass-spectrometry
mokapotFast and flexible semi-supervised learning for peptide detection in Python
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Mutual labels: proteomics
PTXQCA Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
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Mutual labels: proteomics
ElMavenLC-MS data processing tool for large-scale metabolomics experiments.
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Mutual labels: mass-spectrometry
PredFullThis work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
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Mutual labels: mass-spectrometry