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All Projects → PNNL-Comp-Mass-Spec → Thermo-Raw-File-Reader

PNNL-Comp-Mass-Spec / Thermo-Raw-File-Reader

Licence: other
.NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific

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C#
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Thermo Raw File Reader

The Thermo Raw File Reader is a .NET DLL wrapper for reading Thermo .raw files. It originally used the Thermo MS File Reader, but in January 2019 we switched to using the ThermoFisher.CommonCore C# DLLs

Features

The Thermo Raw File Reader DLL provides several methods for parsing the information extracted from Thermo .raw files, including:

  • Determining the parent ion m/z and fragmentation mode in a given scan filter
  • Determining the Ionization mode from a given scan filter
  • Extracting MRM masses listed in a given scan filter
  • Reporting the number of spectra in the .Raw file
  • Returning details on a specific spectrum
  • Obtaining the raw m/z and intensity values for a given spectrum

Software Demo

The Test_ThermoRawFileReader directory contains a .NET command-line application that illustrates how to interface with ThermoRawFileReaderDLL.dll

Contacts

Written by Matthew Monroe for the Department of Energy (PNNL, Richland, WA)
Copyright 2019, Battelle Memorial Institute. All Rights Reserved.
E-mail: [email protected] or [email protected]
Website: https://github.com/PNNL-Comp-Mass-Spec/ or https://panomics.pnnl.gov/ or https://www.pnnl.gov/integrative-omics/

License

The Thermo Raw File Reader is licensed under the 2-Clause BSD License; you may not use this program except in compliance with the License. You may obtain a copy of the License at https://opensource.org/licenses/BSD-2-Clause

Copyright 2018 Battelle Memorial Institute

RawFileReader reading tool. Copyright © 2016 by Thermo Fisher Scientific, Inc. All rights reserved.

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