624 Open source projects that are alternatives of or similar to Afterqc

Bayesian genotyper for structural variants

Genome inference from a population reference graph

Emacs mode for viewing log files.

ABRA2

A comprehensive library for computational molecular biology

Parser and database to index the terpene profile of different strains of Cannabis from online databases

Module to have suggestions in case of errors (NameError, AttributeError, etc).

A tutorial on methods of 16S analysis with QIIME 1

MiXCR is a universal software for fast and accurate extraction of T- and B- cell receptor repertoires from any type of sequencing data. Free for academic use only.

Model and predict short DNA sequence features with neural networks

A library for generating an interactive SVG visualization of CWL workflows

Fast multi-line FASTA/Q reader in several programming languages

Support Vector Structural Variation Genotyper

Sequana: a set of Snakemake NGS pipelines

💧 In memory dataset filtering, inspired by snikch/aggro

Fast Reference-Guided Scaffolding of Genome Assembly Contigs. RagTag, the successor to RaGOO, is now available here: https://github.com/malonge/RagTag

😥A library for android that help to show the layout of loading, error, empty etc.

1kb js library contains development debugging, error monitoring and reporting, user problem localization features - 1KB代码搞定开发调试发布，错误监控上报，用户问题定位

[DEPRECATED] Please upgrade to our Universal JS notifier "@bugsnag/js" • https://github.com/bugsnag/bugsnag-js

MyGene.info: A BioThings API for gene annotations

Bio4j abstract model and general entry point to the project

TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FASTQ files to obtain raw interaction binned matrices (Hi-C like matrices), normalize and correct interaction matrices, identify and compare the so-called Topologically Associating Domains (TADs), build 3D models from the interaction matrices, and finally, extract structural properties from the models. TADbit is complemented by TADkit for visualizing 3D models

Lightweight Iterative Gene set Enrichment in R

An easy way to use for view's empty state 一行代码显示空视图，高度自定义

✏️ A versatile DNA sequence optimizer

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Salentin et al. (2015), https://www.doi.org/10.1093/nar/gkv315

Biological sequences for the julia language

errcheck checks that you checked errors.

Search/filter functionality for Laravel's Eloquent models

Easily add filtering, sorting, and pagination to your Node.js REST API through your old friend: the query string!

GCP Essentials for Bioinformatics Researchers

Analytical Models of the Performance of C-V2X Mode 4 Vehicular Communications

Cute Error Pages for your nginx web server

Create regional association plots from GWAS or meta-analysis

Race and ethnicity Imputation from Disease history with Deep LEarning

Exact Tandem Repeat Finder (not a TRF replacement)

ECG classification programs based on ML/DL methods

Scripts showcasing filtering techniques applied to point cloud data.

Package for fetching metadata and downloading data from SRA/ENA/GEO

Comprehensive toolkit for generating various numerical features of protein sequences

A robust and fast clustering method for amplicon-based studies

Tiny library to parse error stack traces

Code examples of fast and simple k-mer counters for tutorial purposes

Randomly subsample sequencing reads to a specified coverage

Drop-in replacement for the standard library errors package and github.com/pkg/errors

Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R

Automatic panic monitoring for Go and Go web frameworks, like negroni, gin, and revel

A lightweight immune repertoire browser

a collection of small and standalone utilities for image processing, written in C

EasyGrid - VanillaJS Responsive Grid

A fast whole-genome aligner based on de Bruijn graphs

Math.NET Filtering (formerly Neodym)

.NET library for 1D signal processing focused specifically on audio processing

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

Provides access to complex Bioinformatics software (even BioLinux!) in just one command.

Provides a FilterService for Symfony to allow users to implement input filtering in entities using Annotations

Benchmarking programming languages/implementations for common tasks in Bioinformatics

Protein-Level ASSembler (PLASS): sensitive and precise protein assembler

Robust and efficient workflows using a simple language agnostic approach