775 Open source projects that are alternatives of or similar to geneview

(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

Sliders to control matplotlib and other interactive goodies. Works in any interactive backend and even uses ipywidgets when in a Jupyter notebook

A curated list of resources for machine learning for small-molecule drug discovery

Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources

Stacked Denoising AutoEncoder based on TensorFlow

Improving genome bins through the combination of different binning programs

A simple, one-file, header-only, C++ utility for graphs, curves and histograms.

An R package for reproducible and automated ADMIXTOOLS analyses

Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data

pytoda - PaccMann PyTorch Dataset Classes. Read the docs: https://paccmann.github.io/paccmann_datasets/

CoNekT (short for Co-expression Network Toolkit) is a platform to browse co-expression data and enable cross-species comparisons.

Astetik takes away the pain from telling visual stories with data on Python

A plugin to use with napari for clustering objects according to their properties.

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

A package for designing compact and comprehensive capture probe sets.

GRAph-based Finding of Individual Motif Occurrences

An implementation of the Fourier Transform using Python

dysgu-SV is a collection of tools for calling structural variants using short or long reads

2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF

The BridgeDb Library source code

API for linked biological knowledge

Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads

GNparser normalises scientific names and extracts their semantic elements.

An NGS read trimming tool that is specific, sensitive, and speedy. (production)

A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment

Matplotlib for Chez Scheme

In this repository, You can find the files which implement dimensionality reduction on the hyperspectral image(Indian Pines) with classification.

Read and write FASTQ and FASTA efficiently from Python

Repository of PyX, a Python package for the creation of PostScript, PDF, and SVG files.

Interactive Brain Playground - Browser based tutorials on EEG with webbluetooth and muse

Fast hash function for DNA sequences

Computational Analysis of Novel Drug Opportunities

Bystro genetic analysis (annotation, filtering, statistics)

Plotting library for note distributions in different representations of tonal space

The Ensembl Compara Perl API and SQL schema

A faster lmm for GWAS. Supports GPU backend.

My own tools code for NGS data analysis (Next Generation Sequencing)

Using neural networks to build an automatic number plate recognition system.

A simple command-line tool to download data from Joint Genome Institute databases

Haskell bindings for Python's Matplotlib

NumFocus Academy - Matplotlib (beginner)

A modular annotation tool for genomic variants

A Python platform for Structural Bioinformatics

Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub

A library for managing, validating, summarizing, and visualizing data.

Course taught at the University of Bordeaux in the academic year 2017 for PhD students.

Trame let you weave various components and technologies into a Web Application solely written in Python.

Plot data in SVG format using C++ (header only) library .

Assembling the cause of phenotypes and genotypes from NGS data

Rapid determination of appropriate reference genomes.

Method to optimally select samples for validation and resequencing

Data analysis and visualization with PyData ecosystem: Pandas, Matplotlib Numpy, and Seaborn

FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.

No description or website provided.

Final Project of the Udacity AI Programming with Python Nanodegree

Engine for ML/Data tracking, visualization, dashboards, and model UI for Polyaxon.

Mulled - Automatized Containerized Software Repository

Golang for Bioinformatics

📊 A lightweight plotting library

This is the final project for the Udacity Machine Learning Nanodegree: Predicting article retweets and likes based on the title using Machine Learning