Foundations of HPC 2021This repository collects the materials from the course "Foundations of HPC", 2021, at the Data Science and Scientific Computing Department, University of Trieste
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pyccelPython extension language using accelerators
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ClusterAnalysis.jlCluster Algorithms from Scratch with Julia Lang. (K-Means and DBSCAN)
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FaasmHigh-performance stateful serverless runtime based on WebAssembly
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DBSCANc++ implementation of clustering by DBSCAN
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libquoDynamic execution environments for coupled, thread-heterogeneous MPI+X applications
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Ytk Mp4jYtk-mp4j is a fast, user-friendly, cross-platform, multi-process, multi-thread collective message passing java library which includes gather, scatter, allgather, reduce-scatter, broadcast, reduce, allreduce communications for distributed machine learning.
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goudaGolang Utilities for Data Analysis
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Clustering-in-PythonClustering methods in Machine Learning includes both theory and python code of each algorithm. Algorithms include K Mean, K Mode, Hierarchical, DB Scan and Gaussian Mixture Model GMM. Interview questions on clustering are also added in the end.
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Primecount🚀 Fast prime counting function implementations
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dbscanDBSCAN Clustering Algorithm C# Implementation
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EdgeExtreme-scale Discontinuous Galerkin Environment (EDGE)
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EFDCPluswww.eemodelingsystem.com
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wxparaverwxParaver is a trace-based visualization and analysis tool designed to study quantitative detailed metrics and obtain qualitative knowledge of the performance of applications, libraries, processors and whole architectures.
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gpubootcampThis repository consists for gpu bootcamp material for HPC and AI
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AmgclC++ library for solving large sparse linear systems with algebraic multigrid method
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nbodykitAnalysis kit for large-scale structure datasets, the massively parallel way
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tbslasA parallel, fast solver for the scalar advection-diffusion and the incompressible Navier-Stokes equations based on semi-Lagrangian/Volume-Integral method.
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dbscan-python[New Version] Theoretically Efficient and Practical Parallel DBSCAN
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KratosKratos Multiphysics (A.K.A Kratos) is a framework for building parallel multi-disciplinary simulation software. Modularity, extensibility and HPC are the main objectives. Kratos has BSD license and is written in C++ with extensive Python interface.
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Abyss🔬 Assemble large genomes using short reads
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Training MaterialA collection of code examples as well as presentations for training purposes
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point-cloud-clustersA catkin workspace in ROS which uses DBSCAN to identify which points in a point cloud belong to the same object.
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matrix multiplicationParallel Matrix Multiplication Using OpenMP, Phtreads, and MPI
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KernelsThis is a set of simple programs that can be used to explore the features of a parallel platform.
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JohnJohn the Ripper jumbo - advanced offline password cracker, which supports hundreds of hash and cipher types, and runs on many operating systems, CPUs, GPUs, and even some FPGAs
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Torstenlibrary of C++ functions that support applications of Stan in Pharmacometrics
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text clustering文本聚类(Kmeans、DBSCAN、LDA、Single-pass)
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yaskYASK--Yet Another Stencil Kit: a domain-specific language and framework to create high-performance stencil code for implementing finite-difference methods and similar applications.
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pytorch kmeansImplementation of the k-means algorithm in PyTorch that works for large datasets
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Linux-adminShell scripts to automate download of GitHub traffic statistics, cluster administration, and create an animated GIF.
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neworderA dynamic microsimulation framework for python
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lannisterA lightweight MQTT broker w/ full spec,Clustering,WebSocket,SSL written in Java
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FredA fast, scalable and light-weight C++ Fréchet distance library, exposed to python and focused on (k,l)-clustering of polygonal curves.
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cereCERE: Codelet Extractor and REplayer
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PartitionedArrays.jlVectors and sparse matrices partitioned into pieces for parallel distributed-memory computations.
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ClusteringImplements "Clustering a Million Faces by Identity"
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genieclustGenie++ Fast and Robust Hierarchical Clustering with Noise Point Detection - for Python and R
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LIUMScripts for LIUM SpkDiarization tools
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genieGenie: A Fast and Robust Hierarchical Clustering Algorithm (this R package has now been superseded by genieclust)
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SparseLSHA Locality Sensitive Hashing (LSH) library with an emphasis on large, highly-dimensional datasets.
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LinearCorexFast, linear version of CorEx for covariance estimation, dimensionality reduction, and subspace clustering with very under-sampled, high-dimensional data
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newerhoodsA Data Clinic project that aggregates NYC Open Data at the tract-level and uses Machine Learning techniques to re-imagine neighborhood boundaries.
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hmmA Hidden Markov Model implemented in Javascript
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morphoclusterSource code for the MorphoCluster application described in Schroeder et al. 2020
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dropClustVersion 2.1.0 released
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peeling-onionsA repository to store Deep Web (onion domain) crawler, scraper, and NLP tools for Tor network.
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watchmanWatchman: An open-source social-media event-detection system
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mpifxModern Fortran wrappers around MPI routines
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monolishmonolish: MONOlithic LInear equation Solvers for Highly-parallel architecture
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realtimemap-dotnetA showcase for Proto.Actor - an ultra-fast distributed actors solution for Go, C#, and Java/Kotlin.
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PencilFFTs.jlFast Fourier transforms of MPI-distributed Julia arrays
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dbcsrDBCSR: Distributed Block Compressed Sparse Row matrix library
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buddhabrotSingle Core and Multi Core (CPU and GPU) versions of Buddhabrot
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