mondoMondo Disease Ontology
Stars: ✭ 156 (+500%)
uberonAn ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Stars: ✭ 104 (+300%)
obiThe Ontology for Biomedical Investigations
Stars: ✭ 49 (+88.46%)
prontoA Python frontend to (Open Biomedical) Ontologies.
Stars: ✭ 202 (+676.92%)
foodonThe core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
Stars: ✭ 137 (+426.92%)
evidenceontologyEvidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cite ECO. Visit our website for more project info.
Stars: ✭ 35 (+34.62%)
biolink-modelSchema and generated objects for biolink data model and upper ontology
Stars: ✭ 83 (+219.23%)
kozaData transformation framework for LinkML data models
Stars: ✭ 21 (-19.23%)
SEPIO-ontologyOntology for representing scientific evidence and provenance information
Stars: ✭ 40 (+53.85%)
OLGAan Ontology SDK
Stars: ✭ 36 (+38.46%)
cowlA lightweight C/C++ library for working with Web Ontology Language (OWL) ontologies
Stars: ✭ 18 (-30.77%)
ont-apiONT-API (OWL-API over Apache Jena)
Stars: ✭ 20 (-23.08%)
envoA community-driven ontology for the representation of environments
Stars: ✭ 106 (+307.69%)
semantic-python-overview(subjective) overview of projects which are related both to python and semantic technologies (RDF, OWL, Reasoning, ...)
Stars: ✭ 406 (+1461.54%)
fiboThe Financial Industry Business Ontology (FIBO) defines the sets of things that are of interest in financial business applications and the ways that those things can relate to one another. In this way, FIBO can give meaning to any data (e.g., spreadsheets, relational databases, XML documents) that describe the business of finance.
Stars: ✭ 204 (+684.62%)
semanticscienceThe Semanticscience Integrated Ontology (SIO) provides a simple, integrated ontology of types and relations for rich description of objects, processes and their attributes.
Stars: ✭ 52 (+100%)
mobiMobi is a decentralized, federated, and distributed graph data platform for teams and communities to publish and discover data, data models, and analytics that are instantly consumable.
Stars: ✭ 41 (+57.69%)
obo-relationsRO is an ontology of relations for use with biological ontologies
Stars: ✭ 63 (+142.31%)
lsw2OWL and Semantic Web toolkit for Common Lisp, used for construction and reasoning over ontologies and ontology-structured data
Stars: ✭ 22 (-15.38%)
PheKnowLatorPheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
Stars: ✭ 74 (+184.62%)
semantic-webStoring ontologies/vocabularies from the web. Wish anybody can translate some of them.
Stars: ✭ 114 (+338.46%)
owl2neo4jConvert OWL to labeled property graph and import into Neo4J
Stars: ✭ 42 (+61.54%)
COBAn experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)
Stars: ✭ 23 (-11.54%)
fastobo-pyFaultless AST for Open Biomedical Ontologies in Python.
Stars: ✭ 21 (-19.23%)
ontobiopython library for working with ontologies and ontology associations
Stars: ✭ 104 (+300%)
agreementmakerAgreementMaker Ontology Matching System
Stars: ✭ 33 (+26.92%)
jsishJsi is a small, C-embeddable javascript interpreter with tightly woven Web and DB support.
Stars: ✭ 32 (+23.08%)
JovianMetagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.
Stars: ✭ 14 (-46.15%)
ont-apiONT-API (OWL-API over Apache Jena)
Stars: ✭ 31 (+19.23%)
OMOP2OBOOMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
Stars: ✭ 55 (+111.54%)
dipperData Ingestion Pipeline for Monarch
Stars: ✭ 50 (+92.31%)
xDscDiagnosticsThis module contains cmdlets for analyzing DSC event logs.
Stars: ✭ 29 (+11.54%)
pyLODEAn OWL ontology documentation tool using Python and templating, based on LODE
Stars: ✭ 116 (+346.15%)
EMMOElementary Multiperspective Material Ontology (EMMO)
Stars: ✭ 44 (+69.23%)
Health-Discernment-SystemA menu based multiple chronic disease detection system which will detect if a person is suffering from a severe disease by taking an essential input image.
Stars: ✭ 25 (-3.85%)
ontologyRepository for the Open Energy Ontology (OEO)
Stars: ✭ 71 (+173.08%)
python-mvdxmlA mvdXML checker and w3c SPARQL converter, as an IfcOpenShell submodule or stand-alone.
Stars: ✭ 28 (+7.69%)
mpraMedicinal Products Registry API, from dane.gov.pl, with GraphQL.
Stars: ✭ 16 (-38.46%)
friendly-plansSupporting system of behavioral therapy of people with autism. Check starter kit:
Stars: ✭ 24 (-7.69%)
bunDC/OS diagnostics bundle analysis tool
Stars: ✭ 13 (-50%)
medicinedbsqlite medicine database
Stars: ✭ 29 (+11.54%)
deidbest effort anonymization for medical images using python
Stars: ✭ 108 (+315.38%)
amigoAmiGO is the public interface for the Gene Ontology.
Stars: ✭ 26 (+0%)
verroufloating-point errors checker
Stars: ✭ 39 (+50%)
virtoolViral infection diagnostics using next-generation sequencing
Stars: ✭ 36 (+38.46%)
agroAgrO describes agronomic practices, techniques, and variables used in agronomic experiments.
Stars: ✭ 39 (+50%)