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Top 12 monarchinitiative open source projects

A modern web UI for revealing and understanding Monarch Initiative information.

✭ 14

Vue javascript monarchinitiative

Schema and generated objects for biolink data model and upper ontology

✭ 83

python Jupyter Notebook Makefile yaml neo4j json-api rdf owl specification standard gene-ontology datamodel monarchinitiative obofoundry biolink ncats-translator knowledge-graphs ncats linkml

Data transformation framework for LinkML data models

✭ 21

python Makefile etl ontology knowledge-graph monarchinitiative obofoundry linkml koza

Monarch web application and API

✭ 40

javascript HTML Vue CSS python Gherkin api monarchinitiative

Java library to map LOINC-encoded test results to Human Phenotype Ontology

✭ 19

java healthcare fhir loinc ehr hpo monarchinitiative

loinc2hpoAnnotation

loinc2hpo Annotation Data

✭ 18

python loinc hpo monarchinitiative loinc2hpo

phenol: Phenotype ontology library

✭ 15

java genomics ontologies phenotypes monarchinitiative phenomics human-phenotype-ontology mammalian-phenotype-ontology

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

✭ 104

emacs lisp Makefile perl HTML prolog shell ontology anatomy uberon metazoa geneontology monarchinitiative obofoundry anatomy-ontology gross-anatomy

Medical action ontology

✭ 26

HTML Jupyter Notebook Makefile scala shell ruby medicine owl ontology medical diagnostics interventions treatments treatment monarchinitiative obofoundry

Mondo Disease Ontology

✭ 156

Jupyter Notebook HTML prolog Makefile perl python owl ontology mondo disease monarchinitiative disease-classification obofoundry

Ontology for representing scientific evidence and provenance information

✭ 40

Makefile shell scala ruby Batchfile provenance evidence monarchinitiative obofoundry

Data Ingestion Pipeline for Monarch

✭ 50

python HTML awk monarchinitiative

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