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nifiDeploy a secured, clustered, auto-scaling NiFi service in AWS.
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datajobBuild and deploy a serverless data pipeline on AWS with no effort.
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vectorA high-performance observability data pipeline.
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scATAC-proA comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
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human genomics pipelineA Snakemake workflow to process single samples or cohorts of paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.
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AnimationDNAMaya > Arnold > Nuke pipeline
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transtatsTrack translations and automate workflow.
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pipeFunctional Pipeline in Go
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dolphinnextA graphical user interface for distributed data processing of high throughput genomics
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pipelineRDA chain of responsability pattern implementation in .NET that supports retry policy, sync and async steps, rollback, pipeline recovery by cache and visual documentation using diagrams.
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pachinkomodular pluggable media sorter
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HTGSThe Hybrid Task Graph Scheduler API
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pocoInteractive pipeline filtering in PowerShell (a port of peco).
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gawnGenome Annotation Without Nightmares
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XProc-ZA platform for running XProc pipelines as web applications in a Java servlet container
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streamalgExtensible stream pipelines with object algebras.
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saisokuSaisoku is a Python module that helps you build complex pipelines of batch file/directory transfer/sync jobs.
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gulp-sortSort files in stream by path or any custom sort comparator
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nemesystGeneralised and highly customisable, hybrid-parallelism, database based, deep learning framework.
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ngs-preprocessA pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
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lncpipeUNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets
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LTRpredDe novo annotation of young retrotransposons
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makepipeTools for constructing simple make-like pipelines in R.
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tpackPack a Go workflow/function as a Unix-style pipeline command
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MegFlowEfficient ML solution for long-tailed demands.
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cmdcMaya Python API 3.0
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