397 Open source projects that are alternatives of or similar to pypiper

Maya Python API 3.0

⚙️ Schedule notebooks, run them like APIs, expose securely your assets: Jupyter as a viable ⚡️ Production environment

create tool-agnostic, templated pipelines to be shared by multiple teams

A pixel classification based multiplexed image segmentation pipeline

Pipeline: GitHub

A single-cell RNAseq pipeline for 10X genomics data

Deploy a secured, clustered, auto-scaling NiFi service in AWS.

GREIN : GEO RNA-seq Experiments Interactive Navigator

Powerful pipes for TypeScript, that chain Promise and ADT for you 🚌 -> ⛰️ -> 🚠 -> 🏂 -> 🚀

Spline is a tool that is capable of running locally as well as part of well known pipelines like Jenkins (Jenkinsfile), Travis CI (.travis.yml) or similar ones.

Exome/Capture/RNASeq Pipeline Implementation using snakemake

Tensorflow object detection with tracking based on the DeepSort algorithm

A bioinformatics pipeline to analyze mtDNA from NGS data

Multi-sample somatic variant caller

Multilocus sequence typing by blast using the schemes from PubMLST

Pipelines you can compute on

HUAWEI AV Pipeline Kit sample code project, which contains the Java sample code to implement functions like video playback, video super-resolution and media asset management. C++ sample code is contained for calling MediaFilter to use the sound event detection plugin.

A simple Jenkins plugin to promote artifacts.

Custom BASH script for build, archive, export and upload APK and IPA to server with Telegram notification

A Snakemake workflow to process single samples or cohorts of paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.

A homology-based, computationally lightweight pipeline for discovering genes in the absence of an assembly

Cloud computing is a game changer for developers. What can you do in a couple hundred lines of code?

No description or website provided.

Saisoku is a Python module that helps you build complex pipelines of batch file/directory transfer/sync jobs.

Bioinformatics curated workflows that use Biocontainers tools

RNA mapping pipeline

A high-performance observability data pipeline.

Open source VFX pipeline tool

Extensible stream pipelines with object algebras.

Handwritten digit recognizer using a feed-forward neural network and the MNIST dataset of 70,000 human-labeled handwritten digits.

Jenkins plugin for using DAGsHub as a source for multibranch projects

A high performance, high expansion, easy to use framework for AI application. 为AI应用的开发者提供一套统一的高性能、易用的编程框架，快速基于AI全栈服务、开发跨端边云的AI行业应用。

A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies

No description or website provided.

modular pluggable media sorter

Event-driven data pipelines

A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

A PySide2 based file and asset manager for animation and CG productions.

A workshop on Unix Programming Principles using tools such as grep, sed, awk, shell programming and regular expressions

A declarative KubeFlow Management Tool

Pack a Go workflow/function as a Unix-style pipeline command

a web system to allow users to automatically record history and manage complicated scientific workflows in web browsers involving the online spatial data facilities, high-performance computation platforms, and open-source libraries.

A graphical user interface for distributed data processing of high throughput genomics

A library for creating and curating reproducible pipelines for scientific and industrial machine learning

Interactive pipeline filtering in PowerShell (a port of peco).

An example of how to run a Node.js project in Docker in a Buildkite pipeline

Jenkins Pipeline As Yaml Plugin

MultiBranch Actions Trigger Plugin

Erlang Parse Transforms Including Fold (MapReduce) comprehension, Elixir-like Pipeline, and default function arguments

Skin export / import tools for Autodesk Maya

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

Automatically transfer issues in pipeline by commit message

Extensive de-novo TE Annotator

Distribution of TEs and their relationship to genes in host genome

A python package for optimizing processing pipelines using statistical design of experiments (DoE).

Jenkins Blue Ocean pipeline editor

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

This repo holds configuration for infrastructure used across the tektoncd org 🏗️

Improve the quality of a denovo assembly by scaffolding and gap filling