809 Open source projects that are alternatives of or similar to Sv Callers

[NOT MAINTAINED] A starter kit for developing WordPress themes with Gulp.

Genomics data visualization in Python by using matplotlib.

A scikit-learn compatible library for graph kernels

(No maintenance) Detect gene fusion directly from raw fastq files

A tool for managing builds of monorepo frontend projects with eg. npm- or yarn workspaces, lerna or similar tools into a standalone application - no other tools needed.

Open-source bioinformatics components for Dash

Assembling the cause of phenotypes and genotypes from NGS data

Python and C++ code for reading and writing genomics data.

Stacked Denoising AutoEncoder based on TensorFlow

Manage your Pocket list with Alfred

Use Alfred to browse through your Microsoft OneNote notebooks, section groups and sections and then jump to them instantly.

A lightweight immune repertoire browser

🚀 Build and Publish Your Hugo Site to GitHub Pages 🚀

GitHub Action, for publishing distribution files to PyPI

An action that allows you to check whether your npm package version has been updated

flowable workflow designer base on @antv/g6

Rapid determination of appropriate reference genomes.

A web developer workflow tool by WeChat team based on tmt-workflow, with cross-platform supported and environment ready.

(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

Generic germline variant annotation pipeline

cookie cutter template for my r workflow

Bioinformatics one liners from Ming Tang

Send emails to recipients and groups from Alfred

Emoji-Log — An Emoji Git commit log messages spec standard. [ 📦👌🐛📖🚀🤖 ‼️]

is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Packaged, Pytorch-based, easy to use, cross-platform version of the CRAFT text detector

Make your workflow more efficient.

Fast and flexible ORF finder

KNIME Analytics Platform

Bystro genetic analysis (annotation, filtering, statistics)

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang

Elegant Git is an assistant who carefully automates routine work with Git.

GitHub Action that adds compressed size changes to your PRs.

A Python platform for Structural Bioinformatics

(formerly eelpond) an automated RNA-Seq workflow system

Workflow and documentation templates that help teams formalize their goals, workflow and governance model to encourage participation and field contributions.

Function-oriented Make-like declarative workflows for R

Method to optimally select samples for validation and resequencing

基于C#语言研发的Smartflow-Sharp工作流组件，该工作流组件的特点是简单易用、方便扩展、支持多种数据库访问、高度可定制化，支持用户按需求做功能的定制开发，节省用户的使用成本

Making it easier to build stable, trustworthy data-science pipelines.

Check Wiki for details

A collection of publications on comparison of high-throughput sequencing technologies.

Goobi workflow - Workflow management software for digitisation projects used in more than 70 cultural heritage institutions in at least 17 countries.

An orchestration platform for the development, production, and observation of data assets.

NotSelwyn's over-engineered automatic profile readme

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

Compute N50/NG50 and auN/auNG

Lightweight workflow engine for .NET Standard

🐛 How to use CENTIPEDE to determine if a transcription factor is bound.

JAMP - Just Another Metabarcoding Pipeline

Curated list of bioinformatics formats and publications

A blazing fast js bundler/loader with a comprehensive API 🔥

Build and maintain multiple custom conda environments all in once place.

😱 Notify you when CI fails.

⛏️ ‎ A front-end design toolkit for developing web apps.

A cross-platform command-line tool for executing jobs in parallel

𝙋𝙝𝙮𝙡𝙤𝙜𝙚𝙣𝙚𝙩𝙞𝙘 𝘾𝙤𝙢𝙥𝙤𝙣𝙚𝙣𝙩 𝙂𝙧𝙖𝙥𝙝 ⸺ Haskell program and libraries for general phylogenetic graph search

Earl Grey: A fully automated TE curation and annotation pipeline

The Workflow component provides tools for managing a workflow or finite state machine.