awesome-conformal-predictionA professionally curated list of awesome Conformal Prediction videos, tutorials, books, papers, PhD and MSc theses, articles and open-source libraries.
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federated pcaFederated Principal Component Analysis Revisited!
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wellengA collection of Wells/Drilling Engineering tools, focused on well trajectory planning for the time being.
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Machine LearningA repository of resources for understanding the concepts of machine learning/deep learning.
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DRComparisonComparison of dimensionality reduction methods
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sefA Python Library for Similarity-based Dimensionality Reduction
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pytorch-ensemblesPitfalls of In-Domain Uncertainty Estimation and Ensembling in Deep Learning, ICLR 2020
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partitionA fast and flexible framework for data reduction in R
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chempropFast and scalable uncertainty quantification for neural molecular property prediction, accelerated optimization, and guided virtual screening.
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Bioindustrial-ParkBioSTEAM's Premier Repository for Biorefinery Models and Results
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mathematics-statistics-for-data-scienceMathematical & Statistical topics to perform statistical analysis and tests; Linear Regression, Probability Theory, Monte Carlo Simulation, Statistical Sampling, Bootstrapping, Dimensionality reduction techniques (PCA, FA, CCA), Imputation techniques, Statistical Tests (Kolmogorov Smirnov), Robust Estimators (FastMCD) and more in Python and R.
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loloA random forest
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uncertainty-wizardUncertainty-Wizard is a plugin on top of tensorflow.keras, allowing to easily and efficiently create uncertainty-aware deep neural networks. Also useful if you want to train multiple small models in parallel.
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ezancestryEasy genetic ancestry predictions in Python
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spatial-smoothing(ICML 2022) Official PyTorch implementation of “Blurs Behave Like Ensembles: Spatial Smoothings to Improve Accuracy, Uncertainty, and Robustness”.
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pre-trainingPre-Training Buys Better Robustness and Uncertainty Estimates (ICML 2019)
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UQ360Uncertainty Quantification 360 (UQ360) is an extensible open-source toolkit that can help you estimate, communicate and use uncertainty in machine learning model predictions.
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twpca🕝 Time-warped principal components analysis (twPCA)
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Data-ScienceUsing Kaggle Data and Real World Data for Data Science and prediction in Python, R, Excel, Power BI, and Tableau.
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CalibrationWizard[ICCV'19] Calibration Wizard: A Guidance System for Camera Calibration Based on Modelling Geometric and Corner Uncertainty
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ProSelfLC-2021noisy labels; missing labels; semi-supervised learning; entropy; uncertainty; robustness and generalisation.
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MonoRUn[CVPR'21] MonoRUn: Monocular 3D Object Detection by Reconstruction and Uncertainty Propagation
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timely-beliefsModel data as beliefs (at a certain time) about events (at a certain time).
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torchuqA library for uncertainty quantification based on PyTorch
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sandySampling nuclear data and uncertainty
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SafeAIReusable, Easy-to-use Uncertainty module package built with Tensorflow, Keras
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DUNCode for "Depth Uncertainty in Neural Networks" (https://arxiv.org/abs/2006.08437)
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survHESurvival analysis in health economic evaluation Contains a suite of functions to systematise the workflow involving survival analysis in health economic evaluation. survHE can fit a large range of survival models using both a frequentist approach (by calling the R package flexsurv) and a Bayesian perspective.
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Machine Learning With PythonPractice and tutorial-style notebooks covering wide variety of machine learning techniques
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Awesome Single CellCommunity-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
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UmapUniform Manifold Approximation and Projection
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HARRecognize one of six human activities such as standing, sitting, and walking using a Softmax Classifier trained on mobile phone sensor data.
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Competitive-Feature-LearningOnline feature-extraction and classification algorithm that learns representations of input patterns.
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tGPLVMtGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data
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Unsupervised-Learning-in-RWorkshop (6 hours): Clustering (Hdbscan, LCA, Hopach), dimension reduction (UMAP, GLRM), and anomaly detection (isolation forests).
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dbMAPA fast, accurate, and modularized dimensionality reduction approach based on diffusion harmonics and graph layouts. Escalates to millions of samples on a personal laptop. Adds high-dimensional big data intrinsic structure to your clustering and data visualization workflow.
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NIDS-Intrusion-DetectionSimple Implementation of Network Intrusion Detection System. KddCup'99 Data set is used for this project. kdd_cup_10_percent is used for training test. correct set is used for test. PCA is used for dimension reduction. SVM and KNN supervised algorithms are the classification algorithms of project. Accuracy : %83.5 For SVM , %80 For KNN
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dmlR package for Distance Metric Learning
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UMAP.jlUniform Manifold Approximation and Projection (UMAP) implementation in Julia
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bhtsneParallel Barnes-Hut t-SNE implementation written in Rust.
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SpectreA computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.
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timecorrEstimate dynamic high-order correlations in multivariate timeseries data
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adenineADENINE: A Data ExploratioN PipelINE
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pymdeMinimum-distortion embedding with PyTorch
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walkletsA lightweight implementation of Walklets from "Don't Walk Skip! Online Learning of Multi-scale Network Embeddings" (ASONAM 2017).
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scHPFSingle-cell Hierarchical Poisson Factorization
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ReductionWrappersR wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)
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tldrTLDR is an unsupervised dimensionality reduction method that combines neighborhood embedding learning with the simplicity and effectiveness of recent self-supervised learning losses
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50-days-of-Statistics-for-Data-ScienceThis repository consist of a 50-day program. All the statistics required for the complete understanding of data science will be uploaded in this repository.
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lfdaLocal Fisher Discriminant Analysis in R
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topometryA comprehensive dimensional reduction framework to recover the latent topology from high-dimensional data.
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enstopEnsemble topic modelling with pLSA
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ParametricUMAP paperParametric UMAP embeddings for representation and semisupervised learning. From the paper "Parametric UMAP: learning embeddings with deep neural networks for representation and semi-supervised learning" (Sainburg, McInnes, Gentner, 2020).
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mosesStreaming, Memory-Limited, r-truncated SVD Revisited!
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