All Projects → milescsmith → ReductionWrappers

milescsmith / ReductionWrappers

Licence: BSD-3-Clause license
R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)

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ReductionWrappers

R wrappers around dimensionality reduction methods found in Python modules. Uses the reticulate package to expose functionality. Additionally provides bridging functions that let these work as drop-in replacements when working with Seurat (verions 3) and SingleCellExperiment objects. Currently wraps:

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