668 Open source projects that are alternatives of or similar to Vcfr

Genomic Data Retrieval with R

Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources

Development repository for the Bioconductor package 'mixOmics '

MISO: An open-source LIMS for NGS sequencing centres

Bayesian haplotype-based mutation calling

〰️ htmlwidget for creating streamgraph visualizations in R

Games to procrastinate with RStudio

A Package for Helping You Choose Which Package to Use

A Chrome Remote Interface written in R

R package to access Adobe Analytics Reporting API v1.4

R interface to jq

The most complete R development and data science platform.

an R package to hold and facilitate interaction with natural earth map data 🌍

Data Science in the tidyverse, a two-day workshop @ rstudio:conf(2018)

A library for creating complex UpSet plots with ggplot2 geoms

ralger makes it easy to scrape a website. Built on the shoulders of titans: rvest, xml2.

🌶 Create lightweight schema.org descriptions of your datasets

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

🗯️ Easily create pretty popup messages (modals) in Shiny

Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

An R wrapper for the mapshaper javascript library

A tool to circularize genome assemblies

📦 for using large(r) data files on GitHub

A Grammar of Animated Graphics

💂 Tools to Transform and Query Data with 'Apache' 'Drill'

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.

A shiny extension for server side file access

Creating interactive R Problem Sets. Automatic hints and solution checks. (Shiny or RStudio)

Convert many data formats to & from GeoJSON & TopoJSON

structural variant calling and genotyping with existing tools, but, smoothly.

nim wrapper for htslib for parsing genomics data files

✂️ Extract Tables from Microsoft Word Documents with R

An R package for working with NCAA Basketball Play-by-Play Data

Pin, Discover and Share Resources

🏛️ Give tours of your Shiny apps

Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

High performance raster conversion for modern spatial data 🚀🌏▦

Digital Ocean R client

R client for various CrossRef APIs

Graphic Devices Based on AGG

📈 Grammar of graphics for interactive visualisations

An R package to enable reproducible data processing, packaging and sharing.

Geocoding Made Easy

Code examples of fast and simple k-mer counters for tutorial purposes

R client for the Google Translation API, Google Cloud Natural Language API and Google Cloud Speech API

Data visualisation using OpenStreetMap objects

Tasks Integrating Continuously: CI-Agnostic Workflow Definitions

👷‍♂️ A simple package for extracting useful features from character objects 👷‍♀️

d3.js helpers for R

Check if a package name is available to use

An "R" package for automatic download and preprocessing of MODIS Land Products Time Series

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

General purpose API response tidier

🎨 A colour picker tool for Shiny and for selecting colours in plots (in R)

RStudio Addin, function, & shiny app for the write-good linter 📝

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

Predict Gender from Names Using Historical Data

A Swiss version of the famous visualization «Land doesn't vote, people do.»

R package for Customer Behavior Analysis