9 open source projects by jts

de novo sequence assembler using string graphs

Signal-level algorithms for MinION data

FM-index representation of a de Bruijn graph

Simple convertor from bam to FASTQ

Bam Read Index - Extract alignments from a bam file by readname

Code for nanopore paper

Experimental pipeline for correcting nanopore reads

Small collection of tools for performing quality control on coronavirus sequencing data and genomes