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Top 5 bioregistry open source projects
PheKnowLator
PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
✭ 74
python
Jupyter Notebook
semantic-web
owl
knowledge-graph
benchmarks
ontologies
linked-open-data
mechanisms
biomedical-applications
translational-research
obofoundry
biolink-model
bioregistry
pybel
🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
✭ 99
python
Jupyter Notebook
bioinformatics
systems-biology
networks
biological-expression-language
pybel
networks-biology
bioregistry
bioregistry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
✭ 43
python
Jupyter Notebook
HTML
TeX
biocuration
bioregistry
biopragmatics
biomappings
🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
✭ 24
python
HTML
semantics
ontology
mappings
biocuration
bioregistry
biopragmatics
pyobo
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
✭ 32
python
HTML
bioinformatics
obo
ontologies
obofoundry
bioregistry
biopragmatics
1-5
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bioregistry projects