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Top 3 contact-matrix open source projects

Software for comparing contact maps from HiC, CaptureC and other 3D genome data.

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Jupyter Notebook python bioinformatics bioinformatics-pipeline contact-matrix hi-c hic 3d-genome 3c capture-c

A versatile tool to perform pile-up analysis on Hi-C data in .cool format.

✭ 42

python shell genomics contact-matrix hi-c sparse-matrix pileup

A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains

✭ 23

python bioinformatics genomics tad contact-matrix hi-c cooler tads chromatin

1-3 of 3 contact-matrix projects