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Top 3 genomics-data open source projects

sentieon-dnaseq

Sentieon DNAseq

✭ 18

shell acceleration gatk bioinformatics-pipeline variant-calling dnaseq bwa-mem dna-sequencing sentieon gatk4 genomics-data

pandas-genomics

Pandas ExtensionDtypes for dealing with genomics data

✭ 40

python shell genomics-data pandas-extensiondtypes

Highly performant data storage in C++ for importing, querying and transforming variant data with C/C++/Java/Spark bindings. Used in gatk4.

✭ 77

C++java python CMake shell scala spark genomics mpi variant-calling variant genomics-data genomicsdb

1-3 of 3 genomics-data projects