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Top 5 microbiome-analysis open source projects

Metagenomics calibration R package

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r metagenomics r-package microbiome-analysis marker-gene-analysis amplicon-sequencing

Qiita - A multi-omics databasing effort

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python HTML javascript PLpgSQL Makefile shell CSS microbiome microbiome-analysis

Various functions for analysis of microbial community data

✭ 25

r microbial-communities microbiome 16s microbiome-analysis microbial-ecology amplicon-sequencing null-model

topological data analysis of population-scale microbiomes

✭ 24

python topological-data-analysis microbiome-analysis

R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.

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r rstats microbiome microbiota microbiome-analysis

1-5 of 5 microbiome-analysis projects