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Top 12 topological-data-analysis open source projects

Uniform Manifold Approximation and Projection

✭ 5,268

python machine-learning visualization dimensionality-reduction umap topological-data-analysis

A topological data analysis library for Haskell

✭ 26

haskell library topology topological-data-analysis

A library for exploring persistent homology

✭ 81

C++python CMake machine-learning persistence persistent-homology topological-data-analysis

Uniform Manifold Approximation and Projection (UMAP) implementation in Julia

✭ 93

julia Jupyter Notebook visualization machine-learning dimensionality-reduction umap topological-data-analysis

Parallel reduction of boundary matrices for Persistent Homology with CUDA

✭ 14

Cuda matlab shell python Makefile M parallel-computing cuda gpu-computing persistent-homology topological-data-analysis numerical-computation

Synthetic data sets apt for Topological Data Analysis

✭ 20

python Makefile topology dataset topological-data-analysis tda

R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.

ANTz immersive 3D data visualization engine

✭ 25

c C++Makefile data-science data-visualization video-processing data-analysis visual-effects topological-data-analysis visualization-tools openxr mixed-reality-toolkit antz hyperglyphs

topological data analysis of population-scale microbiomes

✭ 24

python topological-data-analysis microbiome-analysis

A comprehensive dimensional reduction framework to recover the latent topology from high-dimensional data.

✭ 64

python visualization data-science machine-learning clustering graphs scikit-learn data-visualization information-visualization dimensionality-reduction topology-visualiztion dimension-reduction topological-data-analysis knowledge-representation topology-optimization single-cell-genomics single-cell-analysis single-cell-omics data-topology

topological-autoencoders

Code for the paper "Topological Autoencoders" by Michael Moor, Max Horn, Bastian Rieck, and Karsten Borgwardt.

✭ 82

python shell Makefile autoencoder persistent-homology topological-data-analysis tda

The detection of peaks and valleys in a 1d-vector or 2d-array (image)

✭ 121

python shell topology mesh sonar mask sar 3d-reconstruction topological-data-analysis denoising-images peak-detection peak-analysis speckle-noise

1-12 of 12 topological-data-analysis projects