biowasm / biowasm Licence: MIT license
WebAssembly modules for genomics
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A repository of genomics tools, compiled from C/C++ to WebAssembly so they can run in a web browser.
Tool
Why biowasm?
sandbox.bio Runs command-line tools in the browser to power interactive tutorials
CZ ID (repo )Runs htsfile and seqtk to identify data issues before file upload
Datagrok (repo )Runs kalign in the browser for multiple-sequence alignment analysis
bedqc (repo )Runs bedtools in the browser to validate BED files
Ribbon (repo )Runs samtools in the browser to parse, estimate coverage and subsample BAM files
fastq.bio (repo )Runs fastp in the browser to evaluate sequencing data quality
Tool
Description
Link
biowasm
Recipes for compiling C/C++ genomics tools to WebAssembly
This repo
biowasm CDN
Free server hosting pre-compiled tools for use in your apps
biowasm.com/cdn
Aioli
Tool for running these modules in a browser, inside WebWorkers
biowasm/aioli
See CONTRIBUTING.md .
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for each open source project belongs to its rightful owner.
If you wish to add or remove any projects, please contact us at
[email protected] .
