All Projects → pylattice → pyLattice

pylattice / pyLattice

Licence: BSD-3-Clause license
A python library for advanced lattice light-sheet image analysis

Programming Languages

Jupyter Notebook
11667 projects
matlab
3953 projects

Projects that are alternatives of or similar to pyLattice

python-bioimage-analysis-tutorial
The new and improved 2018 version of the EMBL Python BioImage Analysis Tutorial. Now finally in python 3!
Stars: ✭ 41 (+156.25%)
Mutual labels:  biological-data-analysis, image-analysis
about-time
A cool helper for tracking time and throughput of code blocks, with beautiful human friendly renditions.
Stars: ✭ 36 (+125%)
Mutual labels:  tracking
sdks
Polyaxon Clients & Langange SDKS
Stars: ✭ 12 (-25%)
Mutual labels:  tracking
ITKSphinxExamples
Cookbook examples for the Insight Toolkit documented with Sphinx
Stars: ✭ 48 (+200%)
Mutual labels:  image-analysis
ARFaceFilter
Javascript/WebGL lightweight face tracking library designed for augmented reality webcam filters. Features : multiple faces detection, rotation, mouth opening. Various integration examples are provided (Three.js, Babylon.js, FaceSwap, Canvas2D, CSS3D...).
Stars: ✭ 72 (+350%)
Mutual labels:  tracking
cpp-iout
C++ Implementation of IOU Tracker presented in AVSS17
Stars: ✭ 33 (+106.25%)
Mutual labels:  tracking
trackanimation
Track Animation is a Python 2 and 3 library that provides an easy and user-adjustable way of creating visualizations from GPS data.
Stars: ✭ 74 (+362.5%)
Mutual labels:  tracking
KCF-Tracking
KCFcpp的Visual Studio2015版本
Stars: ✭ 45 (+181.25%)
Mutual labels:  tracking
6DOF tracking evaluation
Code visualize and evaluate the dataset from "A Framework for Evaluating 6-DOF Object Trackers".
Stars: ✭ 34 (+112.5%)
Mutual labels:  tracking
epictracker
A demo of how can I track you using fingerprinting and some automated lookups and stuff, using modern Javascript APIs
Stars: ✭ 17 (+6.25%)
Mutual labels:  tracking
mixpanel-react-native
Official React Native Tracking Library for Mixpanel Analytics
Stars: ✭ 69 (+331.25%)
Mutual labels:  tracking
edusense
EduSense: Practical Classroom Sensing at Scale
Stars: ✭ 44 (+175%)
Mutual labels:  tracking
Object-Detection-And-Tracking
Target detection in the first frame and Tracking target by SiamRPN.
Stars: ✭ 33 (+106.25%)
Mutual labels:  tracking
BirdsEye
Applying Perspective transformations to 2d images.
Stars: ✭ 22 (+37.5%)
Mutual labels:  tracking
SGP.NET
C# SGP4 Satellite Prediction Library. Load satellites from TLEs, convert between coordinate systems and reference frames, observe satellites from ground stations, and more.
Stars: ✭ 15 (-6.25%)
Mutual labels:  tracking
Face-Detection-and-Tracking
Face Detection and tracking using CamShift, Kalman Filter, Optical Flow
Stars: ✭ 30 (+87.5%)
Mutual labels:  tracking
impy
Speed up coding/extending image analysis in Python.
Stars: ✭ 21 (+31.25%)
Mutual labels:  image-analysis
siamfc-pytorch-gpu-benchmark
No description or website provided.
Stars: ✭ 17 (+6.25%)
Mutual labels:  tracking
OAD
Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.
Stars: ✭ 90 (+462.5%)
Mutual labels:  image-analysis
guardian trackable
A Guardian hook to track user sign ins.
Stars: ✭ 25 (+56.25%)
Mutual labels:  tracking

pyLattice

A python library for advanced lattice light-sheet image analysis

Welcome!

Logo

Installation

clone or download the repository

pip install pylattice
pip install -r requirements.txt
cd src/jupyter
jupyter notebook

in browser open src/jupyter/latticeFrame_showFrame.ipynb

Test data

A small test data set can be found here: https://www.dropbox.com/sh/znznvp1lmvwfykp/AADzJB456aFHll1bYCPzdQhNa?dl=0

Manual

Please read the manual to get started. Read the docs.

Tutorials

Please find tutorials to pyLattice here

FAQ

Lattice Light-Sheet Microscopy

Cite

Please cite our work if you find pyLattice useful: https://doi.org/10.1091/mbc.E18-06-0375

Contribute

Please help us to make LLSM imaging more accessible to the community! Fork the repo, add code and create a pull request. Here you can find our Contributor Guidelines.

References

Note that the project description data, including the texts, logos, images, and/or trademarks, for each open source project belongs to its rightful owner. If you wish to add or remove any projects, please contact us at [email protected].