195 Open source projects that are alternatives of or similar to artificial-neural-variability-for-deep-learning

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

Fast and scalable spike sorting in python

Fast spike sorting with drift correction for up to a thousand channels

Deep Learning with Tensor Flow for EEG MNE Epoch Objects

ONI-compatible hardware, firmware, and host APIs for advanced neuroscience experiments.

BrainFlow is a library intended to obtain, parse and analyze EEG, EMG, ECG and other kinds of data from biosensors

Nengo interactive visualizer

Generate custom Docker and Singularity images, and minimize existing containers

For running psychology and neuroscience experiments

Collaborative Annotation Toolkit for Massive Amounts of Image Data

Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.

Brian is a free, open source simulator for spiking neural networks.

A multi-purpose GPU-accelerated open-source suite for brain data visualization

Platform-independent lightweight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments

Mother of All BCI Benchmarks

Inner ear models for Python

Parameterizing neural power spectra into periodic & aperiodic components.

A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.

A publicly-editable collection of open computational neuroscience resources

Real-time position tracker for behavioral research

EntroPy: complexity of time-series in Python (DEPRECATED)

The Tensorflow code and a DeepMind Lab wrapper for my article "Meta-Reinforcement Learning" on FloydHub.

a python based software for visualization of neuroanatomical and morphological data.

A curated list of awesome neuroscience libraries, software and any content related to the domain.

MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

An R package for experimental psychologists

The MATLAB toolbox for MEG, EEG and iEEG analysis

Graphical experiment builder for the social sciences

MNE-CPP: A Framework for Electrophysiology

A list of schools and researchers in computational neuroscience

Connectome Workbench

A Collection Python EEG (+ ECG) Analysis Utilities for OpenBCI and Muse

EPFL summaries & cheatsheets over 5 years (computer science, communication systems, data science and computational neuroscience).

A toolbox for integrated information theory.

Biologically-realistic recurrent convolutional neural networks

ERPLAB Toolbox is a free, open-source Matlab package for analyzing ERP data. It is tightly integrated with EEGLAB Toolbox, extending EEGLAB’s capabilities to provide robust, industrial-strength tools for ERP processing, visualization, and analysis. A graphical user interface makes it easy for beginners to learn, and Matlab scripting provides enormous power for intermediate and advanced users.

A fullstack javascript app for capturing and visualizing OpenBCI EEG data

CS198-96: Intro to Neurotechnology @ UC Berkeley

A multi-dimensional embedding algorithm

cell detection in calcium imaging recordings

A Python interface for ABF files

Stratum <-> Stratum Proxy and optimizer for ethminer

PyTorch Connectomics: segmentation toolbox for EM connectomics

Blue Brain Python Optimisation Library

Temporal Network Tools

Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬

A motor unit based model of skeletal muscle and fatigue

NEURON Simulator

Preparatory Materials, Self-guided Learning, and Project Management for Neuromatch Academy activities

Brain Imaging Analysis Kit

Automated mouse atlas propagation

Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.

A Python library for creating and simulating large-scale brain models

Brain Modeling Toolkit

TAPAS - Translational Algorithms for Psychiatry-Advancing Science

Over-engineered Brainfuck optimizing compiler and interpreter

🕝 Time-warped principal components analysis (twPCA)

Visualizer for large-scale and interactive ray-tracing of neurons

Distributed, Versioned, Image-oriented Dataservice

python implementations of Analyzing Neural Time Series Textbook